Solanum lycopersicum mRNA Solyc08g080190.2.1

mRNA details  
Name
Solyc08g080190.2.1
Type
mRNA
Length
2,270
Organism
Solanum lycopersicum
Description
Choline dehydrogenase (AHRD V1 ***- A8NUQ9_COPC7); contains Interpro domain(s) IPR012132 Glucose-methanol-choline oxidoreductase
Location(s)
SL2.50ch08:63512188..63517202
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016614
  • GO:0006066
  • GO:0050660
Length
5015
Nb exon
5
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g080190.2.1 Choline dehydrogenase (AHRD V1 ***- A8NUQ9_COPC7); contains Interpro domain(s) IPR012132 Glucose-methanol-choline oxidoreductase

TTATAATATATAGTTTTTTTTTTCTTTATTCAAATTCTACACATATTTTTTTGGACCTAACTAGTCATTTTCTTTCTTCCTTTATATAATTTCTCCAAATCACTATTATATAGTTCTACTTCTTTCTCAAATATTCAAGAAATTCACAATTCCTGCATTTTCTTGTTCCTTAAAATTATATACTGAAAATTCTATTAAGGAACATTTTGTGTTTTCCAAATTAATTGCCGTCCAAATTGTTTGAATTTTACTATATAACATCTTTTTTTTCTTTCTACTTTTCCATCAATCTTAAGATCATTAAATATATTAAATTAATTAAACAAAATGGAGTTTAATTTGATTATTGCTACTCTTCTTGGAATTTTCCTCTTTCATGGATTTTGTACTTCCGAAAAAGCTCCAAATTACTCATTTATGCGCCAAGCAACTACAGCACCGGAGATATCACATTACGATTACATAATCATCGGCGGCGGCACCGCTGGCTGCCCATTAGCCGCCACGCTCTCTCAGAACTACGACGTACTTCTACTAGAGCGCGGTGGTTCACCTTACGGAAATCCTAATATCACATATTTATCGGCATTCGGATCTGCACTTTCCGATCTCTCACCGAAATCGCCATCTCAGCGATTCATCTCCGAGGACGGTGTAATCAACGCGCGTGCACGCGTTTTGGGCGGCGGAAGTTGTTTAAACGCCGGATTTTACTCACGCGCCGGCACAAAGTATGTGAGCAGCGTTGGATGGGACGGACAACTCGTGAACGAATCGTATGTTTGGGTGGAAAATAAAGTGGCGTTTCAGCCGCCGGTGAGGCAGTGGCAGTCCGCCGTGCGCGACGGTCTTGTGGAGTCAGGGGTGGTGCCGTACAATGGATTTACGTACGATCATATTAATGGAACTAAAATTGGGGGCACGATTTTCGATGCCGCCGGCCGTCGGCACACGGCTGCCGATCTACTTGAGTATGCTAAACCTAGTGGAATTACACTACTTTTGCATGCTACCGTTCACAAAATCATATTCCAAACTAGAGGATTATCAAGACCAAAAGCTCATGGTGTAATATTTAGAGATGCATTAGGAAAAAAACACACAGCATATTTAAGAAGAGGAGAAATGAATGAAGTAATAGTATCATCTGGGGCACTTGGAAGCCCACAAATGTTAATGTTAAGTGGTGTAGGCCCATCAGAACACTTAAAGGCCCATAACATTACAGTTGTATTGGATCAGCCCAATGTTGGACAAAACATGATGGATAATCCAATGAATGCAATATTTGTGCCATCACCTTTACCTGTTGAAGTTTCTCTTATACAAGTTGTGGGTATTACAAGATTTGGAACTTATATTGAAGCTGCCTCCGGCGAGAATTTCTCCGGTTATCGTTCTAGTCGGAGTGATTATGGAATGTTCTCCCCGAAGATTGGTCAGCTATCAACAGTGCCACCAAAGCAAAGAACACCAGAAGCCTTAGAAAAGGCTATAAATTCAATGAATGCACTAGATGCAGCAGCATTTAGAGGAGGATTCATATTAGAAAAAATAATGGGCCCAATATCCACTGGACATTTGGAGCTCCGAACCCGGAACCCGAATGACAACCCATCAGTAACATTTAATTATTTCAAAGAGCCAGAAGATTTACAAAGATGTGTAGATGGACTCAAAATTATAGAAAATATAATTGAGTCAAAATCATTTTCACAATTCAGATATGACTCAATTTCATTGCCAGCATTACTTAATTTGACTGCAAGTGCTCCAGTCAATTTATTGCCTAAACATGACAATATTTCAGTCTCATTGGAACAATTCTGTAAAGATACTGTTATGACAATTTGGCATTATCATGGAGGGTGTCAAGTTGGCAATGTTGTTGATCAAGATTATAAGGTTATTGGTATTGATAATTTGAGGGTTATTGATGGTTCAACTTTTAATTATTCTCCTGGTACTAATCCTCAAGCCACTGTCATGATGCTTGGAAGGTATATGGGAGTAAGGATAGTGAATGAGAGACTTGCTAAAGAGGAGTCAAATTAATTGATAATAAATTCGTTTCTTCTTCTTTTGTTATCTTTTGTTTATGAATGAGAGTGGATTAATTAAGAATATATAATACGATGTAAAAAATTGAGTTCATTCTCTGTAATAATAATCCCCATAATTTCAGTAACAATATGTtttaagcttAATTATTGATCTGGTGAATAATTCTGAATTAATTTTTAATGAACATTTTCATTGGGATGTCGTTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g080190.2.1SL2.50ch08:63512402..63516875576-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g080190.2SL2.50ch08:63512188..635172025,015-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g080190.2.1.1SL2.50ch08:63516803..63517202400-2
exonexon:Solyc08g080190.2.1.2SL2.50ch08:63515556..63516197642-2
exonexon:Solyc08g080190.2.1.3SL2.50ch08:63514503..63514894392-n/a
exonexon:Solyc08g080190.2.1.4SL2.50ch08:63513153..63513718566-1
exonexon:Solyc08g080190.2.1.5SL2.50ch08:63512188..63512457270-n/a
intronintron:Solyc08g080190.2.1.2SL2.50ch08:63516198..63516802n/a-n/a
intronintron:Solyc08g080190.2.1.3SL2.50ch08:63514895..63515555n/a-n/a
intronintron:Solyc08g080190.2.1.4SL2.50ch08:63513719..63514502n/a-n/a
intronintron:Solyc08g080190.2.1.5SL2.50ch08:63512458..63513152n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17913704%2Fdetails feature 17913704
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