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Solanum lycopersicum mRNA Solyc08g080460.1.1

mRNA details  
Name
Solyc08g080460.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc08g080460.1.1
Length
2,271
  
Description
Serine/threonine protein kinase (AHRD V1 *-** C4PKQ3_PRUPE); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
Location(s)
SL2.50ch08:63751452..63756463
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006468
  • GO:0007165
  • GO:0006355
Length
5012
Nb exon
15
Sifter term
  • GO:0005515
  • GO:0004712
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g080460.1.1 Serine/threonine protein kinase (AHRD V1 *-** C4PKQ3_PRUPE); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

ATGTCGCCACCACTACCACTTTCCTATTCCGCCGTCATGGGTGGTTCCGGTACCGGTTCCGACGGTTCACAATCGAATCGGTCCCGAGTTCTGGCGGAACGATTGCGATCATTGGAAGCAAGTTATGTGAAACTTAGGGAACAATTTAACTTGCTTTTGGAAGAAAACAGTACTAGTAAGGATTCAGACGATGATGCCTGTGATACGGGGTCGTATTGCGGTCCAGGAGTGTTCTATTCCGGGTATCCGTACAGAAATGTGTTGGAAGATATGGGTCATGCACTTTACGTTACCAAAATTGGTACAGGGGACATCATTTACTGGAACCAAGCTGCTGAGAAACTTTATGGATATAAAGTCCATGAAGTAGTCGGACAGAGGTGTACTGAACTGCTTATTTGTGAAGAATATCATGAGTTAGCTATGCATTCTGTGAAAAGATTGAGCTGTGGACAATCATGGACGGATCAGTTTCCTTTTAAGAAGAGAAGTGGTGAGATCTTTATGGCTATAGTGTCGAAAAGCCTAATGTACGAGGATGGTGAACTTTTTGGTGTTGTCACTGTCTCAAGTGATGCAGCTTTCTTAAATAAGATAAACTCTGAAAAATCAAGAACCTCTCAGTCGTCTAACGGACAAGCAGGAAGGCGGGGAATAAATTTTAAAAGTACCCGGTGGCATCCACAGAGTCAAACTGCATCATTTGTTCCCAATCTGGTGGCCTCAAAAGTCTTCTCGTTTAATCGTGGAGAGGATGCACACAGAGACCGAGAAGAGGTTGAAGGAGACACCATAGGAGGGCAATCACAAAAGCCACCTAGAGCACCCGCTGCACGACTGAGTTTCAGTTTGCTAGGTAGGAAGAGCAGAACTAATGCAGAAATCTCAGAAATGGACGAGTCTCCGTTTGACATTGTGCAACCTTCTAAACTAGTGGCGAAGGTCATGTCAAAGCTGAACATTACAGGATTTGGAAACATTGGAGGAGAAAAGTGTGGAAATGTTCAACAGAATCAGCATGATGAAACTTTTGCTAATGTGAACGTTGTGCAACCTAATTTACCTCCGTCTTCCGAGGGAAAATATACTCATGTTCTTGATGCCTATCATGATCCCCAGAATATACTGAAAGGGTCATGTTTTACTCGACAAAGAACGATTACTCCTGAAAATGCACAAATAACATCCTCTGATATCATAGAGGGTTCTATAGCTACCTGCTCCAGAAAGTTCGACAACCAAATTAATGATAACTATCGTAAGACACAAATAGGAAACTCAAAACTTCCAGTAATAGAAGATTCATCAGGACAGCAGTTAGAAAACCAACAGTCACGGAAGTCAGGGGAGAACACTAGAAGCAGCCAAGGAAGCTCATCAAACAAAAATGAGAATGAGTTGAGCTTGGTAGTACATTGTGAAATACGTTGGGAAGACATCAGCCTAAGCGAAGATATTGGACAAGGTGCATTCGGCGTTGTGTATCACGGAATTTGGAAAGGATCGGATGTTGCTGTTAAGGTTTTCTTTGGGAACCAATGCGGCGATACAACTTTGCTTGACTACAAAAAGGAGATTGACATAATGAAAAGACTTAGACATCCGAACGTGCTATTATTTATGGGAGCAGTAAGTTCACAGGAAAAACTTGCCATTATCACCGAGTATATGCCCAGGGGAAGTCTTTTTAAAGCACTTCACAGGAATAATCCGCCACTAGACCTCAAAAGGCGTCTTAGGATGGCCCTTGATGTGGCTAGGGGTATGTGTTACTTGCATCGACGGAATCCTCCTATAGTACATAGAGACCTTAAATCTTCAAACCTGCTTGTGGATAAAAGCTGGACTGTCAAGGTTGGAGATTTTGGCCTGTCAAAATTGAAACATGCTACCTTCTTAACAGCAAATTCTGGACGAGGGACGCCGCAGTGGATGGCTCCTGAAGTACTTAGAAATGAACCTTCAACAGAGAAATCTGATGTCTTCAGTTTCGGTGTGATCTTGTGGGAACTAATGACTGAATCTGTTCCTTGGAAGGACCTTAATCCTTTACAGGTTGTCGGAGTTGTTGGATTCATGGATGGTAGGCTGGATATTCCGCAAAAACTTGATCCTCGCGTTTCAGCTATTATCCTTGATTGTTGGCAAAGCAAACCAGAACTTCGTCCATCATTCGAAGACATTAGCCGAAGAATGACAGATATAATTCTCTCATTTGGTGGATTGACATCTAGGAAGAACTCAGGAGGAATGGTATCAAACACAGATTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g080460.1.1SL2.50ch08:63751451..63756463757+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g080460.1SL2.50ch08:63751452..637564635,012+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g080460.1.1.1SL2.50ch08:63751452..63751774323+n/a
exonexon:Solyc08g080460.1.1.10SL2.50ch08:63754996..6375509499+n/a
exonexon:Solyc08g080460.1.1.11SL2.50ch08:63755193..6375526169+n/a
exonexon:Solyc08g080460.1.1.12SL2.50ch08:63755367..6375541650+n/a
exonexon:Solyc08g080460.1.1.13SL2.50ch08:63755731..6375581282+1
exonexon:Solyc08g080460.1.1.14SL2.50ch08:63756043..6375613795+n/a
exonexon:Solyc08g080460.1.1.15SL2.50ch08:63756343..63756463121+1
exonexon:Solyc08g080460.1.1.2SL2.50ch08:63752617..63753013397+1
exonexon:Solyc08g080460.1.1.3SL2.50ch08:63753116..63753223108+n/a
exonexon:Solyc08g080460.1.1.4SL2.50ch08:63753457..63753561105+n/a
exonexon:Solyc08g080460.1.1.5SL2.50ch08:63753662..63754193532+n/a
exonexon:Solyc08g080460.1.1.6SL2.50ch08:63754354..6375439441+2
exonexon:Solyc08g080460.1.1.7SL2.50ch08:63754497..6375456569+n/a
exonexon:Solyc08g080460.1.1.8SL2.50ch08:63754641..63754741101+n/a
exonexon:Solyc08g080460.1.1.9SL2.50ch08:63754837..6375491579+1
intronintron:Solyc08g080460.1.1.1SL2.50ch08:63751775..63752616n/a+n/a
intronintron:Solyc08g080460.1.1.10SL2.50ch08:63755095..63755192n/a+n/a
intronintron:Solyc08g080460.1.1.11SL2.50ch08:63755262..63755366n/a+n/a
intronintron:Solyc08g080460.1.1.12SL2.50ch08:63755417..63755730n/a+n/a
intronintron:Solyc08g080460.1.1.13SL2.50ch08:63755813..63756042n/a+n/a
intronintron:Solyc08g080460.1.1.14SL2.50ch08:63756138..63756342n/a+n/a
intronintron:Solyc08g080460.1.1.2SL2.50ch08:63753014..63753115n/a+n/a
intronintron:Solyc08g080460.1.1.3SL2.50ch08:63753224..63753456n/a+n/a
intronintron:Solyc08g080460.1.1.4SL2.50ch08:63753562..63753661n/a+n/a
intronintron:Solyc08g080460.1.1.5SL2.50ch08:63754194..63754353n/a+n/a
intronintron:Solyc08g080460.1.1.6SL2.50ch08:63754395..63754496n/a+n/a
intronintron:Solyc08g080460.1.1.7SL2.50ch08:63754566..63754640n/a+n/a
intronintron:Solyc08g080460.1.1.8SL2.50ch08:63754742..63754836n/a+n/a
intronintron:Solyc08g080460.1.1.9SL2.50ch08:63754916..63754995n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17914017%2Fdetails feature 17914017
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