Solanum lycopersicum mRNA Solyc08g080510.2.1

mRNA details  
Name
Solyc08g080510.2.1
Type
mRNA
Length
1,290
Organism
Solanum lycopersicum
Description
Replication factor C subunit 4 (AHRD V1 ***- B6TA83_MAIZE); contains Interpro domain(s) IPR013748 Replication factor C
Location(s)
SL2.50ch08:63785135..63789310
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016855
  • GO:0005663
  • GO:0005524
  • GO:0017111
  • GO:0006260
Length
4176
Nb exon
7
Sifter term
  • GO:0032183
  • GO:0019899
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g080510.2.1 Replication factor C subunit 4 (AHRD V1 ***- B6TA83_MAIZE); contains Interpro domain(s) IPR013748 Replication factor C

TGCAATAGGAGGGTTTTAGGAAGGGCTTATTTTTTTTTCTCTTGGAGTTGAGAAATGGCATCGTCTTCTTCGACATCATCTGGACCAGAAATCCCTTGGGTTGAGAAGTTTCGACCCACCAAAGTATCCGACATCGTCGGCAATGAAGATGCAGTTGCCAGGCTTCAAGTTATTGCTCGTGATGGAAACATGCCCAATCTTATTTTAGCCGGTCCTCCGGGTACTGGCAAAACCACTAGTATATTGGCTCTTGCTCATGAGCTTTTGGGACCAAACTATAAGGAGGCTGTGTTGGAGCTAAATGCATCAGATGATAGGGGCATCGATGTTGTTAGAAACAAAATCAAGATGTTTGCTCAGAAGAAAGTTACTCTACCCCCTGGTCGGCACAAAATAATTATTTTGGACGAGGCTGACAGCATGACATCTGGAGCTCAGCAAGCACTGAGGAGGACAATGGAAATATATTCGAACTCCACTCGCTTTGCTCTTGCCTGCAATACTTCTTCGAAGATTATCGAGCCTATTCAAAGTAGATGTGCCCTGGTTCGATTTGCAAGATTATCTGACCAAGAGATCCTTGGACGCCTTATGGCTGTAGTTGCAGCAGAAAAGGTTGCTTATGTACCTGAAGGCCTTGAAGCTATTATATTTACTGCTGATGGAGACATGAGACAGGGCTTAAATAACTTACAAGCAACACATAGTGGATTTGGTTTTGTCAACCAAGAGAATGTTTTCAAGGTTTGTGACCAACCTCATCCATTGCATGTGAAGAATATGGTGCGGAATGTCCTCGAAGGAAAATTTGATGATGCATGTGCTGGTCTAAAGGCACTGTATGACCTGGGATATTCCCCCACTGACATCATCACAACCCTCTTCCGAATTATAAAGAACTACGATATGGCAGAATATGTAAAGCTGGAATTCTTGAAGGAAACTGGTTTCGCACACATGAGGATCTGCGATGGGGTCGGTTCATATCTCCAAATGTGTGGTCTGCTGGCTAAACTATCATTGGTTCGAGAAACAGCTAAGGCTTCATGATGAGACAGGCATTGAAGTCCTAATCAACTGAGATGAGTCCTCGATGGTCTTCCATTTTATCGCGTTTTCCTAGCTTCTCTTGAAAATAGCTAGCATTTTATATCAAGTGTTAGCCTGTAGAATTGCAAAATTGTTACTGCAATGAGGAAAATGATTGTTGAACCATTATGCATTTCAATTCTACAAATGTGTAAAGGCAGCATTTTGACTCTACTCCATGAATTAACATGTTAGACAAGG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g080510.2.1SL2.50ch08:63785374..63789256332-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g080510.2SL2.50ch08:63785135..637893104,176-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g080510.2.1.1SL2.50ch08:63789101..63789310210-n/a
exonexon:Solyc08g080510.2.1.2SL2.50ch08:63787067..63787173107-1
exonexon:Solyc08g080510.2.1.3SL2.50ch08:63786866..63786967102-1
exonexon:Solyc08g080510.2.1.4SL2.50ch08:63786441..63786636196-n/a
exonexon:Solyc08g080510.2.1.5SL2.50ch08:63785858..63785986129-n/a
exonexon:Solyc08g080510.2.1.6SL2.50ch08:63785572..63785766195-n/a
exonexon:Solyc08g080510.2.1.7SL2.50ch08:63785135..63785485351-n/a
intronintron:Solyc08g080510.2.1.2SL2.50ch08:63787174..63789100n/a-n/a
intronintron:Solyc08g080510.2.1.3SL2.50ch08:63786968..63787066n/a-n/a
intronintron:Solyc08g080510.2.1.4SL2.50ch08:63786637..63786865n/a-n/a
intronintron:Solyc08g080510.2.1.5SL2.50ch08:63785987..63786440n/a-n/a
intronintron:Solyc08g080510.2.1.6SL2.50ch08:63785767..63785857n/a-n/a
intronintron:Solyc08g080510.2.1.7SL2.50ch08:63785486..63785571n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17914078%2Fdetails feature 17914078
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