Solanum lycopersicum mRNA Solyc08g081140.2.1

mRNA details  
Name
Solyc08g081140.2.1
Type
mRNA
Length
2,410
Organism
Solanum lycopersicum
Description
Myc-like anthocyanin regulatory protein (AHRD V1 ***- Q675M5_9ASTE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH
Location(s)
SL2.50ch08:64220802..64225666
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4865
Nb exon
8
Sifter term
  • GO:0003700
  • GO:0042802
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g081140.2.1 Myc-like anthocyanin regulatory protein (AHRD V1 ***- Q675M5_9ASTE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH

TATCCTTGTGAAAAAATGGCTGTTTTGGCCTTGTTTCTTGAAATCTGAAACTAAAAAATTCTCTTTGTATGGTCCAATATGGTTGTGGTCCTGAGAACTAAGATCCCATTTGGGATCAAGATTCAAGATTTATGCTTTCTTGGTGTTTTATGATTTTGGTGTCGTTTTTTAGAATTTTGAGCTGATTTTTTCTTCACTGTCATTTTGGTGAGACAAAAGATTGAAGCTTTGAAAATGGCTATGGGACACCAAGATCAAGATGGAGTCCCAGGCAACTTGAGAAAGCAACTTGCTCTTGCTGTTAGAGGCATTCAATGGAGCTATGCAATCTTCTGGTCAACTGCAGTTACACAACCAGGGGTGTTGAAATGGATTGATGGGTACTATAATGGGGATATCAAGACCAGGAAGACTGTTCAGGCGGGGGAAGTTAATGAAGACCAGCTGGGGTTGCATAGAACTGAGCAATTGAAAGAACTTTATAGTTCCCTCTTAACAAGTGAAAGTGAAGAAGACCTGCAGCCACAGGCCAAAAGGCCGTCGGCCTCATTATCTCCAGAAGATCTCACTGATACAGAGTGGTATTTCCTAGTATGCATGTCATTTGTCTTCAATGTTGGCCAAGGGTTACCAGGGAAGACCTTAGCAACAAATGAAACTGTTTGGCTGTGCAACGCTCACCAAGCCGAGAGTAAAGTCTTTTCTCGTTCTTTGCTAGCAAAGAGTGCATCTATCCAGACTGTTGTATGCTTTCCCTATTTAGGAGGCGTAATTGAGCTGGGAGTCACCGAGCTTGTCACGGAAGATCCTAACCTCATTCAGCAAATAAAAAATTCCTTTCTAGAGGTTGATTACTCCGTTATTTTGAAGAGGCCTAATTATGTCTCCAACGATGCAAAAAATGACACGAATATCGGTAGCCAAAAGCCTGATCATAATGCACTTGAAAATGATGCTTATCCAGTTGAAATAAATTCACCTCATGATAGTTCAAATGGTTTTGTCGCCAATCAAGAGGCAGAAGATTCACTGATGGTGGTAGACGGTATTGGGGAAACTTCACAAGCTCAAAGCTGGAGGTTCATGGATGATAATATCAGTAATGGTGCGAATAATTCCTTGAATTCCAGTGACTGCATCTCTCAAAACAATGCAAATTGTGAAAAGTTGTCCCCTCTTTCGAGTGGAGAGAAGGAAACTAAGCCTTGCCCACTAGACCGTCAAGAGAACGATCAGAAGAAACCGCATCTTTTAGATCACCAAGGAGATGATGCTCAATATCAAGCTGTCCTTTCTACTCTTTTAAAGAGTTCTGACCAATTAACTTTGGGACCACATTTTAGAAATATGAATAAAAAGTCAAGTTTTGCTAGTTGGAAAACCGATATTCAGATGCCGAGATTTGGAACTGCACAAAAACTATTGAAGAAGGTACTTCTTGAAGTTCCTAGAATGCATGCTGGTGTTATACATAAATTCAGCAGAGAAAATGGTAAAAAGAATAGCCTTTGGAGACCAGAAGTTGATGACATTGATAGAAACCGTGTTATTTCAGAGAGAAGGCGAAGAGAAAAGATAAATGAGAGATTTATGCATCTTGCATCGATGCTGCCAACTAGTAGCAAGGTTGACAAAATATCACTACTCGATGAGACAATAGAATACATGAAAGAGCTTGAAAGGAGAGTTCAGGAGCTGGAGGCGAGATCAGCAAGACGATCAAATGATACTGCAGAGCAGACATCTGATAATTGTGGCACTAGCAAATTCAATGACATCAGGGGATCACTACCGAACAAAAGGAAGGCATGTGATATGGATGAAATAGAACCTGAAAGCTCCAATGGATTACTGAAATGTAGTTCAGCTGATAGTATTGTCATCAATATGATCGATAAGGAAGTCTCGATCAAGATGAGTTGTCTTTGGAGCGAGAGCTTGTTGCTTAAAATTATGGAGGCACTGACTGACCTACATATGGATTGCCATACAGTTCAGTCTTCCAACCTTGATGGGATTCTATCCATTGCTATCGAATCCAAGTCAACCGGATCGAAAACACTAGCAGTCGGAACAATTAGAGAAGCACTTCAGAGAGTAGTATGGAAATCTTGAAGATTAGTCAGTCAAGGTTGGTCAATTAAGCCCATATGAAAAAGAGCTTGGTCAGTCCTGTCCTTAGTGGATAGTTAAAGCTTGTGTATAGTATTGTACTTATGCTTTTTTCGAAGATTTGAAAAGCCTAGGGAAAAAGTAGTAATTTGGAGTAGCTTTCTCCTAATGCATCATCCTCTTTCATGATCATCACTTTTTTGTGGTCCTCTAAAAAGTTCATGAAAGTAAAGTTGCTGAATCTTGCTATTGATTTCTGTCCCCACTAACAAAGTTGAAAGGTCATCTCAGGAATGGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g081140.2.1SL2.50ch08:64221035..64225371627+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g081140.2SL2.50ch08:64220802..642256664,865+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g081140.2.1.1SL2.50ch08:64220802..64221160359+n/a
exonexon:Solyc08g081140.2.1.2SL2.50ch08:64222003..64222269267+n/a
exonexon:Solyc08g081140.2.1.3SL2.50ch08:64222622..6422271897+1
exonexon:Solyc08g081140.2.1.4SL2.50ch08:64223099..6422311315+1
exonexon:Solyc08g081140.2.1.5SL2.50ch08:64223387..6422344357+n/a
exonexon:Solyc08g081140.2.1.6SL2.50ch08:64223549..64224379831+n/a
exonexon:Solyc08g081140.2.1.7SL2.50ch08:64224466..64224882417+n/a
exonexon:Solyc08g081140.2.1.8SL2.50ch08:64225300..64225666367+n/a
intronintron:Solyc08g081140.2.1.1SL2.50ch08:64221161..64222002n/a+n/a
intronintron:Solyc08g081140.2.1.2SL2.50ch08:64222270..64222621n/a+n/a
intronintron:Solyc08g081140.2.1.3SL2.50ch08:64222719..64223098n/a+n/a
intronintron:Solyc08g081140.2.1.4SL2.50ch08:64223114..64223386n/a+n/a
intronintron:Solyc08g081140.2.1.5SL2.50ch08:64223444..64223548n/a+n/a
intronintron:Solyc08g081140.2.1.6SL2.50ch08:64224380..64224465n/a+n/a
intronintron:Solyc08g081140.2.1.7SL2.50ch08:64224883..64225299n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17914879%2Fdetails feature 17914879
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