Solanum lycopersicum mRNA Solyc08g081540.2.1

mRNA details  
Name
Solyc08g081540.2.1
Type
mRNA
Length
1,786
Organism
Solanum lycopersicum
Description
1-aminocyclopropane-1-carboxylate synthase (AHRD V1 **** Q96580_SOLLC); contains Interpro domain(s) IPR004839 Aminotransferase, class I and II IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
Location(s)
SL2.50ch08:64567933..64570466
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0009058
  • GO:0030170
Length
2534
Nb exon
4
Sifter term
GO:0016847
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g081540.2.1 1-aminocyclopropane-1-carboxylate synthase (AHRD V1 **** Q96580_SOLLC); contains Interpro domain(s) IPR004839 Aminotransferase, class I and II IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site

TCATTCAACAAATTACTAAATACACAAATAACATTCAAAGCCTCTTAAAGAGCTTCTTTTTTTTTAACAAGAATTAGCAAATACCCATTTCATTTTTTTTGAGAATCTTTGATTCTTTCTCTTTTTGAAAATTAAGATGGTGTCTATTTCAAAGAATAACCAAAAACAACAACTTCTTTCAAAGATAGCCACAAATGATGGTCATGGGGAAAATTCACCTTATTTTGATGGTTGGAAGGCTTATGCAAATAACCCTTTTCATCTAACTGATAATCCTACTGGTGTTATTCAGATGGGTCTTGCTGAAAATCAGCTTTGTTTTGATTTAATCCAAGAATGGATGGTGAATAATCCAAAAGCATCAATTTGCACTGTTGAAGGAGCTGAAAATTTCCAAGATATTGCAATTTTTCAAGATTATCATGGCTTGCCAGAGTTTAGACAAGCAGTTGCAAGGTTTATGGAGAAAGTGAGAGGTGACAGAGTGACATTTGATCCAAACAGAATAGTAATGAGTGGAGGAGCAACTGGTGCTCATGAAATGCTTGCTTTTTGCTTGGCTGATCCTGGTGATGCCTTTTTGGTCCCAACACCATATTATCCAGGATTTGATAGAGATTTGAGATGGAGAACTGGTGTTCAACTATTTCCAGTTGTTTGTGAAAGTTGTAATGATTTCAAAGTGACTACAAAAGCCTTAGAAGAAGCATATGAAAAAGCTCAACAATCCAACATCAAAATAAAAGGCTTACTTATAAACAATCCTTCAAATCCATTAGGTACTCTTCTTGACAAGGACACGCTACGAGACATTGTAACGTTCATCAACTCGAAAAACATCCATTTAGTATGCGATGAAATCTATGCTGCTACGGTGTTTGATCAGCCTAGATTTATCAGTGTATCCGAAATGGTTGAGGAGATGATTGAATGCAACACAGATTTGATCCATATAGTCTATAGCTTGTCTAAAGACTTAGGATTTCCAGGATTCAGAGTTGGAATTGTTTACTCGTACAACGATACAGTTGTAAACATTTCTAGAAAGATGTCAAGTTTCGGGCTAGTTTCAACTCAGACACAACATATGCTAGCATCAATGTTGTCTGATGAGATATTTGTTGAGAAATTCATTGCTGAGAGTTCCGAAAGGCTCGGGAAAAGGCAGGGGATGTTCACAAAAGGACTAGCACAAGTTGGAATTAGTACATTGAAAAGCAATGCTGGTTTGTTTTTCTGGATGGATTTAAGGAGACTGCTTAAAGAAGCAACATTTGATGGTGAGTTAGAATTATGGAGAATTATTATTAATGAAGTAAAACTTAATGTTTCACCAGGATGTTCATTTCATTGTTCTGAACCTGGTTGGTTTAGAGTTTGTTTTGCAAATATGGACGACGAAACGATGAGAATTGCATTAAGAAGGATAAGGAACTTTGTGCTTCAAACAAAGGGACTTAACAACATTGCTGCTATTAAGAAACAATGCAGTAGGAGTAAACTTCAGATCAGCTTATCGTTTCGAAGATTGGATGATTTTAACTCACCAGCTCACTCTCCGATGAATTCGCCTTTGGTTAGGACATAAAGATGAAGAAAAGAATGGCTTAGATTTGTTGTTGTTGTTTGTATAATAAGAGAAGGAAAAAATTTCCTCTGTTATAGTGAAGAGTGATAGTTTTGATGTATACATTTAGTGTTTGATTATACAATTCATTCCATTTTGGATTTTTATCATATGAATTTTTCTATGTAACATTGTATCAAAATGGGATTCAATGTGGAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g081540.2.1SL2.50ch08:64568068..64570268484+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g081540.2SL2.50ch08:64567933..645704662,534+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g081540.2.1.1SL2.50ch08:64567933..64568245313+n/a
exonexon:Solyc08g081540.2.1.2SL2.50ch08:64568568..64568699132+n/a
exonexon:Solyc08g081540.2.1.3SL2.50ch08:64568787..64568947161+n/a
exonexon:Solyc08g081540.2.1.4SL2.50ch08:64569287..645704661,180+n/a
intronintron:Solyc08g081540.2.1.1SL2.50ch08:64568246..64568567n/a+n/a
intronintron:Solyc08g081540.2.1.2SL2.50ch08:64568700..64568786n/a+n/a
intronintron:Solyc08g081540.2.1.3SL2.50ch08:64568948..64569286n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17915462%2Fdetails feature 17915462
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)