Solanum lycopersicum mRNA Solyc08g081770.2.1

mRNA details  
Name
Solyc08g081770.2.1
Type
mRNA
Length
1,708
Organism
Solanum lycopersicum
Description
Predicted membrane protein (Fragment) (AHRD V1 *--- B9GMI0_POPTR); contains Interpro domain(s) IPR001727 Uncharacterised protein family UPF0016
Location(s)
SL2.50ch08:64735463..64741902
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016020
Length
6440
Nb exon
12
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g081770.2.1 Predicted membrane protein (Fragment) (AHRD V1 *--- B9GMI0_POPTR); contains Interpro domain(s) IPR001727 Uncharacterised protein family UPF0016

AAGCTGTTTTGAGTATGATCAGAGGGAGTTGCTCGAATAGTAAGCATTCCTTACTTTCAATTCGAAGGTTGCGAGTTTGAGTTACCAACTGGAGCAAAAGGGGTGGGCCCTCCTAAGGAGAGCAAAGAAAAAGATATCGAGAGCTAGTAGAGATTAAATAATTCAGAATTTTTTCAATCCCTTAATCACTAAGTTAAACCTTTCACTTGTGTCAAGAGATTTCAATATTTATATGTATATATTTACAAACTAAATTATCGCTTGACGCCCTCGGTTAAGGGTGGGTCTGCTGTATAAATTTTAATTTAATCAGATTTCAATATAGAAATCGGTGACTAAAAAAACAAAGATATTATATGCAACGGTTTAACTGGCGTGCCTTTTTGATGAGCTTAGCTTATCCAGAATTGTGATTTTGTTCTGTGACTGTCCACTCTTCTTTCTTCTTCTCTTATCTTTCTCAAAGATCAATTTTTTCTGCTCCTAAAATTTCAAGAATGCGAAGCCTAGTGCTCTCTTGTGAGAGCAGCAGCTTTCTGTTTAAACCCTCTTTTGCTTTATCTAATTTTTCCCCTGTTAATCCCTCTCTAACTGCAATCTCCAGGTTTTCTAGGCGGCATTCTCTTTGCAAACAACATGGATGGTCTGAGGACTTCCCCAAGGTGGTCAGGACTAGGAATTACAAAAGATGCCACATGACAAGGTCGGCTTATTGTGACGAAGAATGCAGTATAACAAACAAAACAGCATTGTCGAAGAGGAAAAATCAAAGCACTTCTGTTCTTCAAGTGTTAGACATGCCAGAGAACAATTATCTGAAATCCATTGTCCTTTCTGGGCTTTTCACTCTTTTGTTCACTCAACAAGCAAGTGCTGCTTCAGAGGTTGCTACTGGTTTGCAGTCGTTTCCTTTCTTCGGGGACCTCGGAGATTTAAGCACAGGTTTTGCTTCAGCGTTCTTGTTGATATTCTTTTCTGAGCTTGGGGACAAAACCTTCTTTATTGCTGCTCTTTTAGCAGCTAGGAATTCAGCCGTTGTCACTTTCCTTGGGACTTTTGGCGCACTTGGGGTAATGACAATCATATCCGTTGTTCTCGGACGAACTTTCCACTATGTCGATGATGTTCTTCCTTTCAGGTTAGGTGGAAATGATTTGCCAGTGGATGATATTGCTGCCGTTTGCCTTCTGGTGTATTTTGGAGTGTCAACCTTGCTTGATGCCTCCTCTAGCGATGGTATGAAAGCGGAAGAGGAACAGAAAGAGGCCGAGCTGGCTGTTTCAGAATTTTCGGGAAATGGTGCTGGACTATTGTCTGCTGCAAGCACCATAGTTAGTACATTCGCATTGGTATTTGTTGCTGAATGGGGTGACAAATCATTTTTTTCTACAATAGCTCTTGCTGCTGCATCTTCACCTCTTGGAGTCATTGGAGGGGCATTAGCTGGCCACGGAGCTGCAACTTTGTTGGCTGTTCTTGGAGGTTCTTTACTGGGGACATTCTTGTCTGAGAAGGTTATTGCCTACATAGGTGGTGCTCTCTTCCTAGTATTTGCAGCAGTAACAGTAATAGAGATAGTGAGTTAAAACAACCATTATTTCATTTTTTTTGTTTTTTTCTAGCAAAATTGTACTTTTTTCATATACATTAGTAGTAATTTATGTTACATAGTTGGATTCGGAATTTAAAATTTATGAGTTGGTCGATA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g081770.2.1SL2.50ch08:64735584..64741405363-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g081770.2SL2.50ch08:64735463..647419026,440-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g081770.2.1.1SL2.50ch08:64741299..64741902604-1
exonexon:Solyc08g081770.2.1.10SL2.50ch08:64737055..6473712571-n/a
exonexon:Solyc08g081770.2.1.11SL2.50ch08:64736687..6473673448-n/a
exonexon:Solyc08g081770.2.1.12SL2.50ch08:64735463..64735656194-n/a
exonexon:Solyc08g081770.2.1.2SL2.50ch08:64740525..6474058258-n/a
exonexon:Solyc08g081770.2.1.3SL2.50ch08:64739813..64740103291-n/a
exonexon:Solyc08g081770.2.1.4SL2.50ch08:64739438..6473949154-n/a
exonexon:Solyc08g081770.2.1.5SL2.50ch08:64739167..6473922862-1
exonexon:Solyc08g081770.2.1.6SL2.50ch08:64738848..6473891669-1
exonexon:Solyc08g081770.2.1.7SL2.50ch08:64737944..6473799552-n/a
exonexon:Solyc08g081770.2.1.8SL2.50ch08:64737775..6473784975-n/a
exonexon:Solyc08g081770.2.1.9SL2.50ch08:64737359..64737488130-2
intronintron:Solyc08g081770.2.1.10SL2.50ch08:64737126..64737358n/a-n/a
intronintron:Solyc08g081770.2.1.11SL2.50ch08:64736735..64737054n/a-n/a
intronintron:Solyc08g081770.2.1.12SL2.50ch08:64735657..64736686n/a-n/a
intronintron:Solyc08g081770.2.1.2SL2.50ch08:64740583..64741298n/a-n/a
intronintron:Solyc08g081770.2.1.3SL2.50ch08:64740104..64740524n/a-n/a
intronintron:Solyc08g081770.2.1.4SL2.50ch08:64739492..64739812n/a-n/a
intronintron:Solyc08g081770.2.1.5SL2.50ch08:64739229..64739437n/a-n/a
intronintron:Solyc08g081770.2.1.6SL2.50ch08:64738917..64739166n/a-n/a
intronintron:Solyc08g081770.2.1.7SL2.50ch08:64737996..64738847n/a-n/a
intronintron:Solyc08g081770.2.1.8SL2.50ch08:64737850..64737943n/a-n/a
intronintron:Solyc08g081770.2.1.9SL2.50ch08:64737489..64737774n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17915707%2Fdetails feature 17915707
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