Solanum lycopersicum mRNA Solyc08g082630.2.1

mRNA details  
Name
Solyc08g082630.2.1
Type
mRNA
Length
2,379
Organism
Solanum lycopersicum
Description
Auxin response factor 9 (AHRD V1 **** D7R605_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
Location(s)
SL2.50ch08:65361536..65365812
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0006355
  • GO:0046983
Length
4277
Nb exon
14
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc08g082630.2.1 Auxin response factor 9 (AHRD V1 **** D7R605_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor

ATGAATTCTCCAGGTAAAAAAGATGCTCTGTATCATGAGCTATGGCAGTTGTGTGCAGGTCCAGTAGTTGATGTTCCCAGGGAAGGAGAAAGAGTTTATTATTTTCCTCAAGGCCACATGGAACAATTGGTAGCATCAATTAATCAAGAAATGGATCAAAGAGTTCCATCATTCAATCTCAAATCAAAGGTCCTTTGTCGAGTTATCAATAGTCATTTCCTGGCTGAAGAAGACAATGATGAGGTCTATGTCCAGATCACTTTGATGCCAGAGGCACCACATGTACCCGAGCCGACTACTCCGGATCCATTAATTCCGCAGGATGTAAAGCCTAGATTCCATTCTTTCTGCAAGGTCCTGACAGCCTCCGATACAAGCACTCATGGTGGATTTTCTGTTCTAAGGAAACATGCTAATGAATGCCTTCCTCCATTGGACTTGAACCAGCAGACTCCGACCCAGGAATTGATTGCGAAAGACCTTCATGACGTGGAGTGGCGCTTCAAGCATATATTTAGAGGCCAACCTCGGAGACATTTACTTACCACAGGGTGGAGTACCTTTGTTTCTTCAAAGAAATTAGTGGCAGGGGATTCTTTTGTATTCTTGAGGGGTAATAATGGACAGCTGCGAGTTGGGGTCAAAAGGCTTGTTCGCCAGCAGAGCTCAATGCCGTCATCGGTGATGTCAAGCCAGAGCATGCACCTAGGAGTCTTGGCTACAGCATCTCATGCTGTTACAACCCAGACAATGTTTGTTGTTTACTACAAACCGAGAACCACTCAGTTCATCGTAGGCGTCAACAAATACTTAGAGGCTCTTAAACATGAATATGCAGTTGGCATGCGATTCAAAATGCAGTTTGAAGCCGAAGGGAATCCTGATAGAAGATTTATGGGCACTATAGTTGGAATTGATGATCTTTCTTCACAGTGGAAAAATTCTGCGTGGCGATCCTTGAAGGTCCGATGGGACGAGCCTGCAGCCATTGCAAGGCCTGACAGAGTTTCTCCTTGGGAAATTAAACCTTATGTGTGTTCAATTCCAAATGTCCTTGTCCCACCAACCGCAGAGAAGAACAAAAGGCATCGGCTACATAGTGAAATCAAAATATCAGAACAACCTTCATCCTCAAATGCTTCGGCGGTTTGGAATCCTTCCCTTCGATCGCCTCAGTTTAACACCTTTGGCATCAACAGCAGTACTAATTGCGCATTAGCGTCTCTTACAGAGAGTGGTTGGCAGCTTCCTCATTTAAATACTTCAGGTATGCTTGTGGATGAGCCAGAAGACGGTAGGAGTGCTCCAACTTGGTGTGGTTTTCCATGCGTTTTGGCCCCGCAGTTCGGTCAAGGGACTAATCAGCCGATTGTTATTCCTACTGATGGGAGAAAATGTGATACCAAAAAAACCTGTAGATTATTTGGTATTGACTTGAAAAGTTCCTCAATTAGCACTACTGAGGCACGACTACAGCTACAGCCAGCCGGCATTTCTTGTGTCTTTGCAGAGAGAGCACCTCCAAACACGGTGCCTGCTGGTGATTCAGATCAAAAGTCTGAGCTTTCAGTAGACTTCAAAGATCAAATGCAAGGCCATTTGCGGTTACCCCTAAAGGAGGTTCAAAGCAAGCAGAGTTGTTCCACCAGGTCTCGCACAAAGGTGCAAATGCAAGGCGTAGCTGTAGGTCGTGCAGTGGATTTAACCATATTGAAAGGATACGATGAGCTTACAAAGGAGCTTGAGGAGATGTTTGAAATCCAAGGAGAGCTTCAGTCACGACAGAAATGGGGGATCTTGTTTACAGATGATGAAGGGGATACAATGCTTATGGGTGATTATCCGTGGCAAGACTTTTGCAATGTGGTGAGGAAGATTTTCATTTGTTCAAGTCAGGATATGAAAAAATTGACCCTGTCTCGCGCAGACAGTTAAGCAGCTCCTTTCAAATGAAATGATGGCGGAAGATGGTGAAAGTTAAAGACTCCGCCTTTTGAAGTGGTACCGTTTTGTGATCTCTTTGGCTTCATTCTCTATATATAGTAGGAAAGAACGACAGGTTGTTGACATAGCAAGGCGTAGAAGCTTGTTTTTACGCTCTTTTTAGCCTAGTGCAGCTCCGTTTTGAGAGCAGTTAAGTAAGTAACTAGTTATAATAGGATAAGACTAGTAAAAATATAGTACTAGAAGTAGTAAAAAGTTAAGGGTGTTCTCTAATGGGGAGTCTATATAGTAGTAGTTTATGTAGTTTTCTATTCGCGCGTTAACCTGTAAATACTCATGTGCCATTGTAGTATTCTGGAAATACTACAATGTATGGTCTTGTTAACGTGCTTTATGCCTTATCTTATATGAAAACTCCATGGTGGAGATTGCTCT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc08g082630.2.1SL2.50ch08:65361535..65365368645+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc08g082630.2SL2.50ch08:65361536..653658124,277+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc08g082630.2.1.1SL2.50ch08:65361536..6536154813+n/a
exonexon:Solyc08g082630.2.1.10SL2.50ch08:65363922..6536399473+1
exonexon:Solyc08g082630.2.1.11SL2.50ch08:65364070..65364223154+n/a
exonexon:Solyc08g082630.2.1.12SL2.50ch08:65364332..65364876545+2
exonexon:Solyc08g082630.2.1.13SL2.50ch08:65364984..65365171188+n/a
exonexon:Solyc08g082630.2.1.14SL2.50ch08:65365284..65365812529+1
exonexon:Solyc08g082630.2.1.2SL2.50ch08:65361645..65361757113+2
exonexon:Solyc08g082630.2.1.3SL2.50ch08:65361984..6536207996+n/a
exonexon:Solyc08g082630.2.1.4SL2.50ch08:65362438..6536249760+n/a
exonexon:Solyc08g082630.2.1.5SL2.50ch08:65362584..65362736153+n/a
exonexon:Solyc08g082630.2.1.6SL2.50ch08:65362836..6536292085+n/a
exonexon:Solyc08g082630.2.1.7SL2.50ch08:65363021..6536311191+2
exonexon:Solyc08g082630.2.1.8SL2.50ch08:65363254..65363418165+1
exonexon:Solyc08g082630.2.1.9SL2.50ch08:65363543..65363656114+1
intronintron:Solyc08g082630.2.1.1SL2.50ch08:65361549..65361644n/a+n/a
intronintron:Solyc08g082630.2.1.10SL2.50ch08:65363995..65364069n/a+n/a
intronintron:Solyc08g082630.2.1.11SL2.50ch08:65364224..65364331n/a+n/a
intronintron:Solyc08g082630.2.1.12SL2.50ch08:65364877..65364983n/a+n/a
intronintron:Solyc08g082630.2.1.13SL2.50ch08:65365172..65365283n/a+n/a
intronintron:Solyc08g082630.2.1.2SL2.50ch08:65361758..65361983n/a+n/a
intronintron:Solyc08g082630.2.1.3SL2.50ch08:65362080..65362437n/a+n/a
intronintron:Solyc08g082630.2.1.4SL2.50ch08:65362498..65362583n/a+n/a
intronintron:Solyc08g082630.2.1.5SL2.50ch08:65362737..65362835n/a+n/a
intronintron:Solyc08g082630.2.1.6SL2.50ch08:65362921..65363020n/a+n/a
intronintron:Solyc08g082630.2.1.7SL2.50ch08:65363112..65363253n/a+n/a
intronintron:Solyc08g082630.2.1.8SL2.50ch08:65363419..65363542n/a+n/a
intronintron:Solyc08g082630.2.1.9SL2.50ch08:65363657..65363921n/a+n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17916549%2Fdetails feature 17916549
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