Solanum lycopersicum mRNA Solyc08g083320.2.1
 mRNA details
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| Name | Type |
Length
2,221
|
Organism |
|
Description
Granule-bound starch synthase (AHRD V1 **** B0ZTE3_SOLTU); contains Interpro domain(s) IPR011835 Glycogen/starch synthases, ADP-glucose type
|
|
Location(s)
SL2.50ch08:65815703..65819075
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0009058
- GO:0009250
- Length
- 3373
- Nb exon
- 14
- Sifter term
- GO:0004373
- GO:0005515
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc08g083320.2.1 Granule-bound starch synthase (AHRD V1 **** B0ZTE3_SOLTU); contains Interpro domain(s) IPR011835 Glycogen/starch synthases, ADP-glucose type
CCACCCGCTATTCAATTGACACGTGTCACTGAAACCTGCTACAAATAAGGCACCTCACTCACACACACAGCGTCTCCTCAACTGGTATTTATTTATAGATTTCGACCACACATGGCAAGCATCACAGCTTCACACTTTGTGTCAAGAAGCTCAAATGTCCAAACTTCACTAGACACCAAATCAACCTTGTCACAGATAGGACTCAGGAACCATACTCTGACACACAATGGGTTAAGGGCTGTTAACAAGCTTGATGGGCTCCAATCAAGAACTAATACTAAGGTAACACCCAAGATGAGATCCACCAAGTCAGCTACCATTGTTTGTGGAAAGGGAATGAACTTGATCTTTGTGGGTACTGAGGTTGGTCCTTGGAGCAAAACTGGTGGACTAGGTGATGTTCTTGGTGGACTACCACCAGCCCTTGCAGCCCGCGGACATCGGGTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATACTAGCGTTGCCCTTGAGGTCAAAGTTGGAGACAGCATTGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTTTTGTTGACCACCCAATGTTCTTGGAGAAAGTTTGGGGCAAAACTGGTTCAAAAATCTACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGCTTGTTGTGTCAAGCAGCCCTAGAGGCACCTAGAGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGAGAGGATGTTCTCTTCATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAATGTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTCGCTTTCTGCATCCATAACATTGCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCCTGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGATATGAGAAACCTGTTAAGGGTAGGAAAATCAACTGGATGAAGGCTGGGATATTAGAATCACATAGGGTGGTTACAGTAAGCCCATACTATGCCCAAGAACTTGTCTCTGCTGTTGACAAGGGTGTTGAATTGGACAGTGTCCTTCGTAAGACTTGCATAACTGGGATTGTGAATGGCATGGATACACAAGAGTGGAACCCAGCGACTGACAAATACACAGATGTCAAATACGATATAACCACTGTCATGGACGCAAAACCTTTACTAAAGGAGGCTCTTCAAGCAGCAGTTGGCTTGCCTGTTGACAAGAAGATCCCCTTGATTGGCTTCATCGGCAGACTTGAGGAGCAGAAAGGTTCAGATATTCTTGTTGCTGCAATTCACAAGTTTATCGAATTGGATGTTCAAATTGTAGTCCTTGGAACTGGCAAAAAGGAGTTTGAGCAGGAGATTGAACAGCTCGAAGTGTTGTACCCTAATAAAGCTAAAGGAGTGGCAAAATTCAATGTCCCTTTGGCTCACATGATCACTGCTGGTGCTGATTTTATGTTGGTCCCAAGCAGATTTGAACCTTGTGGTCTCATTCAGTTACATGCTATGCGATATGGAACAGTGCCAATCTGTGCCTCAACTGGTGGACTTGTTGACACTGTGAAAGAAGGCTATACTGGATTCCATATGGGAGCCTTCAATGTTGAATGCGATGTTGTTGACCCAGATGATGTGCTTAAGATAGTAACAACAGTGTCAAGAGCTCTTGCAGTCTATGGCACCCTTGCGTTTGCTGAGATGATAAAAAATTGCATGTCAGAGGAGCTCTCTTGGAAGGAACCTGCCAAGAAATGGGAGACGTTGCTATTGGGCTTAGGAGCTTCTGGCAGTGAACCCGGTGTCGAAGGGGAAGAAATCGCTCCACTTGCCAAGGAAAATGTAGCCACTCCCTAAATGAGCTTTGGTCTTATCCTTGTTTCAACAATAAGGTCATTAATTATGTAGAACCCTAATATGGGGTCTCAGTCATCTATAAAATGAATGGTTTTTGCTGGGGAGCAGCAGGTTAATGTTTTTGTAGGGAAGGGTCAATAGAAAATAGTTATTACTAATGTTTGCGACTAAATGCTTAGTAATGTTAGCATAAATAATACTAGTAGCTAATATGCGTGAATTTGTTTTACTTTTTCTTGCATAATTATTTGCAGTACATATATATAAATTACCCAAGGAATCAATGTTTGTGGCTCCGTCC
CCACCCGCTATTCAATTGACACGTGTCACTGAAACCTGCTACAAATAAGGCACCTCACTCACACACACAGCGTCTCCTCAACTGGTATTTATTTATAGATTTCGACCACACATGGCAAGCATCACAGCTTCACACTTTGTGTCAAGAAGCTCAAATGTCCAAACTTCACTAGACACCAAATCAACCTTGTCACAGATAGGACTCAGGAACCATACTCTGACACACAATGGGTTAAGGGCTGTTAACAAGCTTGATGGGCTCCAATCAAGAACTAATACTAAGGTAACACCCAAGATGAGATCCACCAAGTCAGCTACCATTGTTTGTGGAAAGGGAATGAACTTGATCTTTGTGGGTACTGAGGTTGGTCCTTGGAGCAAAACTGGTGGACTAGGTGATGTTCTTGGTGGACTACCACCAGCCCTTGCAGCCCGCGGACATCGGGTAATGACAATATCCCCCCGTTATGACCAATACAAAGATGCTTGGGATACTAGCGTTGCCCTTGAGGTCAAAGTTGGAGACAGCATTGAAATTGTTCGCTTCTTTCACTGCTATAAACGTGGGGTTGATCGTGTTTTTGTTGACCACCCAATGTTCTTGGAGAAAGTTTGGGGCAAAACTGGTTCAAAAATCTACGGCCCCAAAGCTGGACTGGATTATCTGGACAATGAACTTAGGTTCAGCTTGTTGTGTCAAGCAGCCCTAGAGGCACCTAGAGTTTTGAATTTGAACAGTAGCAACTACTTCTCAGGACCATATGGAGAGGATGTTCTCTTCATTGCCAATGATTGGCACACAGCTCTAATTCCCTGCTACTTAAAGTCAATGTACCAGTCCAGAGGAATCTATTTGAATGCCAAGGTCGCTTTCTGCATCCATAACATTGCCTACCAAGGCAGATTTTCTTTCTCTGACTTCCCTCTTCTCAATCTTCCTGATGAATTCAGGGGTTCTTTTGATTTCATTGATGGATATGAGAAACCTGTTAAGGGTAGGAAAATCAACTGGATGAAGGCTGGGATATTAGAATCACATAGGGTGGTTACAGTAAGCCCATACTATGCCCAAGAACTTGTCTCTGCTGTTGACAAGGGTGTTGAATTGGACAGTGTCCTTCGTAAGACTTGCATAACTGGGATTGTGAATGGCATGGATACACAAGAGTGGAACCCAGCGACTGACAAATACACAGATGTCAAATACGATATAACCACTGTCATGGACGCAAAACCTTTACTAAAGGAGGCTCTTCAAGCAGCAGTTGGCTTGCCTGTTGACAAGAAGATCCCCTTGATTGGCTTCATCGGCAGACTTGAGGAGCAGAAAGGTTCAGATATTCTTGTTGCTGCAATTCACAAGTTTATCGAATTGGATGTTCAAATTGTAGTCCTTGGAACTGGCAAAAAGGAGTTTGAGCAGGAGATTGAACAGCTCGAAGTGTTGTACCCTAATAAAGCTAAAGGAGTGGCAAAATTCAATGTCCCTTTGGCTCACATGATCACTGCTGGTGCTGATTTTATGTTGGTCCCAAGCAGATTTGAACCTTGTGGTCTCATTCAGTTACATGCTATGCGATATGGAACAGTGCCAATCTGTGCCTCAACTGGTGGACTTGTTGACACTGTGAAAGAAGGCTATACTGGATTCCATATGGGAGCCTTCAATGTTGAATGCGATGTTGTTGACCCAGATGATGTGCTTAAGATAGTAACAACAGTGTCAAGAGCTCTTGCAGTCTATGGCACCCTTGCGTTTGCTGAGATGATAAAAAATTGCATGTCAGAGGAGCTCTCTTGGAAGGAACCTGCCAAGAAATGGGAGACGTTGCTATTGGGCTTAGGAGCTTCTGGCAGTGAACCCGGTGTCGAAGGGGAAGAAATCGCTCCACTTGCCAAGGAAAATGTAGCCACTCCCTAAATGAGCTTTGGTCTTATCCTTGTTTCAACAATAAGGTCATTAATTATGTAGAACCCTAATATGGGGTCTCAGTCATCTATAAAATGAATGGTTTTTGCTGGGGAGCAGCAGGTTAATGTTTTTGTAGGGAAGGGTCAATAGAAAATAGTTATTACTAATGTTTGCGACTAAATGCTTAGTAATGTTAGCATAAATAATACTAGTAGCTAATATGCGTGAATTTGTTTTACTTTTTCTTGCATAATTATTTGCAGTACATATATATAAATTACCCAAGGAATCAATGTTTGTGGCTCCGTCC
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc08g083320.2.1 | SL2.50ch08:65816003..65818857 | 603 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc08g083320.2 | SL2.50ch08:65815703..65819075 | 3,373 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc08g083320.2.1.1 | SL2.50ch08:65818992..65819075 | 84 | - | n/a |
| exon | exon:Solyc08g083320.2.1.10 | SL2.50ch08:65816959..65817135 | 177 | - | n/a |
| exon | exon:Solyc08g083320.2.1.11 | SL2.50ch08:65816678..65816869 | 192 | - | n/a |
| exon | exon:Solyc08g083320.2.1.12 | SL2.50ch08:65816420..65816506 | 87 | - | n/a |
| exon | exon:Solyc08g083320.2.1.13 | SL2.50ch08:65816207..65816335 | 129 | - | n/a |
| exon | exon:Solyc08g083320.2.1.14 | SL2.50ch08:65815703..65816120 | 418 | - | n/a |
| exon | exon:Solyc08g083320.2.1.2 | SL2.50ch08:65818540..65818884 | 345 | - | n/a |
| exon | exon:Solyc08g083320.2.1.3 | SL2.50ch08:65818388..65818468 | 81 | - | n/a |
| exon | exon:Solyc08g083320.2.1.4 | SL2.50ch08:65818224..65818322 | 99 | - | n/a |
| exon | exon:Solyc08g083320.2.1.5 | SL2.50ch08:65818068..65818157 | 90 | - | n/a |
| exon | exon:Solyc08g083320.2.1.6 | SL2.50ch08:65817916..65817979 | 64 | - | 2 |
| exon | exon:Solyc08g083320.2.1.7 | SL2.50ch08:65817747..65817847 | 101 | - | n/a |
| exon | exon:Solyc08g083320.2.1.8 | SL2.50ch08:65817547..65817656 | 110 | - | 1 |
| exon | exon:Solyc08g083320.2.1.9 | SL2.50ch08:65817231..65817474 | 244 | - | n/a |
| intron | intron:Solyc08g083320.2.1.10 | SL2.50ch08:65817136..65817230 | n/a | - | n/a |
| intron | intron:Solyc08g083320.2.1.11 | SL2.50ch08:65816870..65816958 | n/a | - | n/a |
| intron | intron:Solyc08g083320.2.1.12 | SL2.50ch08:65816507..65816677 | n/a | - | n/a |
| intron | intron:Solyc08g083320.2.1.13 | SL2.50ch08:65816336..65816419 | n/a | - | n/a |
| intron | intron:Solyc08g083320.2.1.14 | SL2.50ch08:65816121..65816206 | n/a | - | n/a |
| intron | intron:Solyc08g083320.2.1.2 | SL2.50ch08:65818885..65818991 | n/a | - | n/a |
| intron | intron:Solyc08g083320.2.1.3 | SL2.50ch08:65818469..65818539 | n/a | - | n/a |
| intron | intron:Solyc08g083320.2.1.4 | SL2.50ch08:65818323..65818387 | n/a | - | n/a |
| intron | intron:Solyc08g083320.2.1.5 | SL2.50ch08:65818158..65818223 | n/a | - | n/a |
| intron | intron:Solyc08g083320.2.1.6 | SL2.50ch08:65817980..65818067 | n/a | - | n/a |
| intron | intron:Solyc08g083320.2.1.7 | SL2.50ch08:65817848..65817915 | n/a | - | n/a |
| intron | intron:Solyc08g083320.2.1.8 | SL2.50ch08:65817657..65817746 | n/a | - | n/a |
| intron | intron:Solyc08g083320.2.1.9 | SL2.50ch08:65817475..65817546 | n/a | - | n/a |
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