Solanum lycopersicum mRNA Solyc09g018960.2.1

mRNA details  
Name
Solyc09g018960.2.1
Type
mRNA
Length
3,187
Organism
Solanum lycopersicum
Description
UBA/TS-N domain protein (AHRD V1 *--- B0Y4B6_ASPFC); contains Interpro domain(s) IPR001623 Heat shock protein DnaJ, N-terminal
Location(s)
SL2.50ch09:17739610..17753558
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0031072
Length
13949
Nb exon
8
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g018960.2.1 UBA/TS-N domain protein (AHRD V1 *--- B0Y4B6_ASPFC); contains Interpro domain(s) IPR001623 Heat shock protein DnaJ, N-terminal

AGGGTGTTTCCATGAGTGAAATAAAAGAAAGAAATGAAAGAGAGGAGAGAGGGGAAAAAGGGAAGCACAGGGCCGGAGGTGGAGGAAGAGGAAGAGACATAGCAAGAAGAAGCAAGACAGATAGAACCCTAACCAAGTCAGATCCATCCGGCGGCAATTGGCCTGTTTTGAAGGGCAGTATCAGATCTATATTAACCAATGGATGACCTCGATGTGTTAGCTCGAGACTTGGGTTTTCGGCACGCAGGAAAATCCGCACCAATGAGATCCGACATCCGATCAACTTCTTCTTCTGATCCTGATCCTATGTTATTCAACGTCTTCGGTGGCCCTCCTAAATACACCAAAACCAATAACTCTGCCGATTACAATTATGATTCTATTTTCGTATCCGCCAAGAACAATAACAACAATGATGATAACATCAAGACCTCCTCCTTCCCTGTCAATGACAAGCCAGTGTACGACGACGATATATTTGACGGCTTACCGGGAGTAAAGAGCAAAGCCCTATCTTCTTCATCTACACTAAGATTTGAGGACGATGTCTTTGCTACAATGACTTCTCCACCTCAACAAAACATTCATTTTGATGATCTCTTGGGGAATTTGGGGAGGAATGAGAAGGTGGCCCAACCAAAGAGCAGTGTTGGTTCCACAGAGTTCGATGATTTACTAGCTGGCTTTGGAACTGGCACCAGTAGCAGGTCATTTACAGATTCAACTTATCCTTCCAAACCAGCTGAAAATTCAAATAAAAGCTCAAGTATGCTGGATGATCCTTTTGTCGTGCTAGAGTCAACTTCGGTGCCAGCAAATTCTTCTGGTGGGGAGTTTTCAGATCCACTGGAAGAGATTGGTAAGCTTGGTAAATCTGGAATGGCGAAAACTGGTGCTTCATCAGTTAGTGGAGGGGTGTTTGATGATTTTAATAAGCCTGTTCGTCCATTTTCCCCTGAGAAGAAGACAGGAGGGAAGGACAGAAGCCCATCAAAGGCTGGAGCAGGAAGGAGTGATGCACATAACTCTCCCTCGAGAGAAAATATTGAGACACCGCCATTTAGATATTCTGAAAGTCACTCGCAGAAAAAAGTGCCTGGGGATAGTTTTCAAGAGTCTCCCCATTTTAACATGTCTTCAGAAGATCCTTTGAGATCTTTGGGTGAAGCTGCTCCTCTGAATGCAGATAATGATCTTCACGAAACAAACTTCCAAGTGGATACATCCCCAAGATCAGAGGACCAAGTACAGGCTTCTGAAGATTCATGGCTTACTGTATCAGAGATTCCTCTTTTCACACAACCTACAAGTGCTCCACCTCCATCGCGACCACCGCCTCCAATACCACGGCGCTGTTCAAAGTCAGAAGCAAGTTTTTCCGCTTCAAATGCAAGGAAGGGTGAGGGTTACTCCTCTTCCCCTAATCACTACCAGTATTCTCAGAGTCCTAAGCGGGTTCGTCCTGCTGTTAAAAGCCCTCCAGTCTCACAGTTGGATGAACTTGAGGATTTCGCCAGGGGTTGGTCTAAGAGTAGTATTGATGAAAATGCTGATGCTCTTTCTGGAGAAGATATGAATGGAAACTCTGTAGCTGCTGCATCAGCAGCTGCAATGAAGGAGGTTATGGATAGAGCTGAGGCCAAATTTAGACATGCTAAGGAAGTCCGAGAAAGAGAATATGCAAAGTCTGCTAAGAGTAAGGAAGCTGTACATCTGGAAAGAGATGAACAAGCAATAAATGAAGTGCAGGAAAGAGAGTTTCAAGGAAACAGGGAGAGACTAGAAAATGAGAGGCGACAGTGGGAGAAGGAAGAGGAAGAAAGAGCACAAAAGAAGCTTGAGAGAGAAAGGGAGAGATCCAGGGAGCTTGAAAAAGAAAGGGCTCGGCAAGCGGTAGAAAGGGCTACTAGGGAAGCACGTGAAAGAGCAGAAGCTGGGGCACGTGACAGAGCTGCTGCTGAAACCCGTCTAAAAGCAGAAAGAGCTGCTGTGGAGAAGGCTGCAGCTGAAGCTCGAGGACGGGCTGAAAAGGCTGCAGTTCAGAGAGCACAAGCAGAAGCTCGGGAAAGAGCTGCAGCAGATGCTAAAGAAAGAGCTGAAAAGGCAGCTGCAGAAGCAAGGGAAAAAGAAGCACGTGAAAAAGCTTTTGCCGCAATGGCCGAGGCTGAGGCACGAAGGCGAGCAGAACGAGCAGCAGTAGAAAGGGCAGCTGCAGAAGCTCGAGAAAGGGCAGCTGCAGAGGCTCGAGAAAGGGCAGCTGCTTCTGCAAGAATGAACCAACAAAGGAATGATAATGATCTTGAATCCTTTTTTAGTATGGGTAGAGCCAGTAGTGCACCAAAGACAAGAACAAGTGACAACATATTTGACTCGCCGTTTCAGAATAAGGCAGGACCTGAAGGGCCAAAATCAACAGCTGGTGTAGCCTCCTCCAACATAAGGAAAGCATCTTCCACGACTAGTTTCGTGGATGATCTTTCTTCTATTTTTGGAGCTTCTGCATCATCTGGAGAGTTCCAAGGTGTTGAAGGGGAAACTGAAGAAAGAAGAAGAGCAAGACTAGAGCGCCATCAACGTACTCAGGAGCGTGCGGCTAAAGCTTTGGCTGAGAAGAATCAGCGTGACCTTCAAGTGCAGAGGGATCAGGAAGAAAGACATAGAATTTCCGAAACATTAGATTTTGAGATCAAGCGATGGGCTGCTGGAAAAGAGGGAAATCTGCGTGCACTTCTATCGACTTTGCAATATGTGCTTTGGCCTGAATGTGGCTGGCAACCTGTGTCCTTGACCGATTTGATTATGGATGCCTCTGTCAAAAAAGTATATAGAAAAGCAACCCTTTGTATTCATCCTGATAAGGTGCAGCAAAAAGGTGCCAACCTTCAACAAAAGTATATTGCCGAGAAGGTTTTTGACCTACTGAAGGAAGCGTGGAACAAATTCAATTCTGAAGAACTCTTCTAGAGACTCAGTTTTAGGTCCCTTTTGTGATTTTCAGAGGTGGGTATATTTTCCTAAAGTAAGCTCGTCCTTGCTATCTATGACTCTGATATCTGGCATTCCCCAGCATGAGGCGTTTGATTGATTTCTATAGCAGTGATGAAGAAGTGAAGTTTCAGTGTGTTGTGTAAATTTATGTCAATGCCAGAGACTTGTGGCTTGTGGATAACGTGTCGGTGTAGAGTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g018960.2.1SL2.50ch09:17739832..17753360922-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g018960.2SL2.50ch09:17739610..1775355813,949-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g018960.2.1.1SL2.50ch09:17752852..17753558707-1
exonexon:Solyc09g018960.2.1.2SL2.50ch09:17747502..177491491,648-n/a
exonexon:Solyc09g018960.2.1.3SL2.50ch09:17747223..17747361139-2
exonexon:Solyc09g018960.2.1.4SL2.50ch09:17747028..1774712598-n/a
exonexon:Solyc09g018960.2.1.5SL2.50ch09:17746809..1774687466-n/a
exonexon:Solyc09g018960.2.1.6SL2.50ch09:17740950..1774103990-n/a
exonexon:Solyc09g018960.2.1.7SL2.50ch09:17740300..17740476177-n/a
exonexon:Solyc09g018960.2.1.8SL2.50ch09:17739610..17739871262-n/a
intronintron:Solyc09g018960.2.1.2SL2.50ch09:17749150..17752851n/a-n/a
intronintron:Solyc09g018960.2.1.3SL2.50ch09:17747362..17747501n/a-n/a
intronintron:Solyc09g018960.2.1.4SL2.50ch09:17747126..17747222n/a-n/a
intronintron:Solyc09g018960.2.1.5SL2.50ch09:17746875..17747027n/a-n/a
intronintron:Solyc09g018960.2.1.6SL2.50ch09:17741040..17746808n/a-n/a
intronintron:Solyc09g018960.2.1.7SL2.50ch09:17740477..17740949n/a-n/a
intronintron:Solyc09g018960.2.1.8SL2.50ch09:17739872..17740299n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17926667%2Fdetails feature 17926667
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