Solanum lycopersicum mRNA Solyc09g057710.2.1

mRNA details  
Name
Solyc09g057710.2.1
Type
mRNA
Length
1,808
Organism
Solanum lycopersicum
Description
Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch09:50228543..50230928
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2386
Nb exon
8
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g057710.2.1 Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

CTCTCCAGTCTCCACCTATATAACTTCCTCTCTCTCTATTTATTTCACTTCCCTCTCCCTAATTTTTTCTTCTTAATATTTTTAAACTTCAATTTAATCATTCATTTTCCATGGAAAAAGACTACTTCATCAATGGAGGAATCCCTAATCCAGCCCTTCAGTTTGAACCTACTATGTCATTCCCTTCTTGGAATCCCTTACATTCAGGGCAATCTTTGTTTAACCCCAACTGGGATCATTCAACACCTCAATTTGACTCAACTTTGAACTCGATTGTATCTTCTTCTCCTGCTGAGTTGATTGGAAAACTGGGTACTGTTTGCAGCTCCCCTCAACCGATTTTGCACAATAACAGTTATAGTAGACCCATGATGGGAAAAGATAATATACCCAATTTGGGAAGTTCACTTCCTCCTCCATTACCTGCTGATCCAGGTTTTGCTCAAAGAGCTGCTAAATTTTCCTGTTTTGGGAGTCGTAGTTTCAACGGCAGAACGAGTCCGTTGGGGTTGAACTATACGGAATTATCACATAGATCTGCTCAAACATTGGGGAACGGAAAGTTGCCTAGAGTTTCGAGTAGCCCTTCTCTCAAGCAAGGTGGATCCCCTTTGCAACTCAAGAATTCGGGTCAAACCCGGATGGAAATGATGTCCAATAACTCTAACGAGTCTGTTTCAGAGCCAAGTGGGGAAACAGCATCGAAACTTCCAACTGAATTGAATTCTAGTTCTAGAAAAAGAAAAACAGTTTCAAGAGGGAAAACAAAGGAAGATTCCCCAACTGAAGGAGTTAATGGAAACAGGGGAAGTGAAGCTGATGATAATGCAAGAGCAAAGCGATGTAAGCAAGTAGAAAGTAATGGGATAGAAAATGGAAGAGTACACATGGAAGAATCAAAGGATGATGAAACCCAAAAACAAGTTATGGAATATCAAAAGCCTACTGAACCACCAAAGGACTATATTCATGTTAGAGCAAGGAGAGGACAAGCTACTGATAGCCATAGTTTAGCAGAAAGAGTGCGACGGGAGAAGATTAGTGAAAGAATGAAGCTTTTACAAGATCTTGTACCTGGCTGTAACAAGGTGACAGGAAAAGCACTAATGCTTGATGAAATTATAAACTATGTACAGTCACTCCAACGACAAGTCGAGTTCCTATCCATGAAGTTGGCAACAGTGAACCCAAATTTGGATTTCCCCCTCTCCAAGGATATATGTCAACCAAATGGCTCTGTGGCCCATCCTGTTTTCCCAATAGATAAAACATCATCTTCTTACCAACAAGGCCGGAGCGATATTCCTAATGGAGCACTAAGTCAATGCTCAGTGGACACATCAGATAACTCACTATGCCGTAGCCTGGGAATGCAATTGCCTCCCCTTGATGGATTTGCTGAATATCTTAATCAGTTCCCTGAGGATGACCTGCAAAGCTTTGTGCAGATGGGATTTACCCAAAACCCCAACAAGGATATGACACTGCAATCACAAGGGCCTCATCAAACGTCTCACATGAAAATTGAGATGTAGTCACCATTCATTTGTCTAGGAAGAAAGAGACTTCTGTGTATAGGAAGAGATTTTTTAGTTTTATCTTTCTTCAGAAATTGTTATTACTACTAATTGACAATATTACCTAAAATTTAATTGTACGAATTTTTTGTTTTGCTAAGTGATGAGTATTTATTGTGTAATAACATTATTAAGATCCAAGAGTCATTTGGGTGCGAACAGCACATGTAATTTTCTTTTTCTTTGTAAATAAATGAGATATTAAGATGTTATTATCATCAGCTTTCATTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g057710.2.1SL2.50ch09:50228815..50230818475-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g057710.2SL2.50ch09:50228543..502309282,386-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g057710.2.1.1SL2.50ch09:50230123..50230928806-n/a
exonexon:Solyc09g057710.2.1.2SL2.50ch09:50229842..50230057216-n/a
exonexon:Solyc09g057710.2.1.3SL2.50ch09:50229705..5022977066-n/a
exonexon:Solyc09g057710.2.1.4SL2.50ch09:50229552..5022962069-n/a
exonexon:Solyc09g057710.2.1.5SL2.50ch09:50229417..5022947660-n/a
exonexon:Solyc09g057710.2.1.6SL2.50ch09:50229149..50229346198-n/a
exonexon:Solyc09g057710.2.1.7SL2.50ch09:50228949..5022903082-2
exonexon:Solyc09g057710.2.1.8SL2.50ch09:50228543..50228853311-n/a
intronintron:Solyc09g057710.2.1.2SL2.50ch09:50230058..50230122n/a-n/a
intronintron:Solyc09g057710.2.1.3SL2.50ch09:50229771..50229841n/a-n/a
intronintron:Solyc09g057710.2.1.4SL2.50ch09:50229621..50229704n/a-n/a
intronintron:Solyc09g057710.2.1.5SL2.50ch09:50229477..50229551n/a-n/a
intronintron:Solyc09g057710.2.1.6SL2.50ch09:50229347..50229416n/a-n/a
intronintron:Solyc09g057710.2.1.7SL2.50ch09:50229031..50229148n/a-n/a
intronintron:Solyc09g057710.2.1.8SL2.50ch09:50228854..50228948n/a-n/a
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Related viewsNone found
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