Solanum lycopersicum mRNA Solyc09g059430.2.1
mRNA details
|
| Name | Type |
Length
1,049
|
Organism |
|
Description
RPM1 interacting protein 4 transcript 2 (AHRD V1 ***- D2J0X9_9ASTR); contains Interpro domain(s) IPR008700 Defence response, Rin4
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|
Location(s)
SL2.50ch09:54430655..54433629
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Length
- 2975
- Sifter term
- GO:0005515
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc09g059430.2.1 RPM1 interacting protein 4 transcript 2 (AHRD V1 ***- D2J0X9_9ASTR); contains Interpro domain(s) IPR008700 Defence response, Rin4
ATGGCTCGTCCAAATGTGCCAAAGTTTGGGAATTGGGAAAATGACGATAATACGCCCTATACTGTATATTTTGAAAAAGCCAGGCAAACTCGTGGTACTGGAAAGATGATGAACCCCAATGATCCCGAAGAGAATCCAGATATGTTTCGTAATCTTGCTCCACCACCTGAAGTTGCTCCTCAATCCAAGCCTAAAAGACAAACAGAGGAACCACCAATTGGGCGTGGTGGACCAGCTAGGCAAACACGGGACCATAGACTAAGTAAAGAAGATGGTGAATTCCGCCAGTATGCTAATTCTCCAGCTCGTAAAGAGAGTGTGGGAAGGAAAGGTGCCAATGAGCCATCTCATCAACGTGGTCGTGGATCAAATTCTGGTAGAACTGGCAGACAAAGTATAGGATCTGAACATAGCTTTGATAAATCACCGCTGCATCCACATTACCAGGCAAAGGTTAGTAATGCTGGAAGAGGTGTTGCATCTCCTGCTTGGGAAGGAAAGAACAATTCTTATGATAGCAGTCACGGTACTCCTGGAAGGTCCAAAGTTAAGCAAGACAAATCTGATAGAGGGGCTGCAGTTCCAAGATTCGGAGAGTGGGACGAGAATGATCCTCAATCTGCTGACAACTACACACACATTTTCAACAAATTCCGAGAGGAAAAGCAAGGAAATCCATCAGGGACACCTAGTAGAACATCGAACAATACACAAAAGCATAACTCAGAGGAAAAGCAAAGGAAGTGGTGTTGTTGTCCCTGGTAATTATGCAAGGGAGGATCTTGATTTTATTCCAAAACAGCCAAGGGATGTGTAAATAGTTCAACAAATTACTTGTGCAATATATTAGAGTAATTCATTTATACTTTGTTCCCACAGTATTCTGCAATTGTATTGTCAACTTGTAGTCTTTAATATTGTACTTGTGTTTGTATGTTACAAACAGTGCTTGCAGATTTTTTATGCTTTCGCAATGTTGTATGTGTGAAGTCTAGTATTGTTGCTTGGTCTTTTCTGGCAATGCAAATGCTTATAATATTTGATTACTG
ATGGCTCGTCCAAATGTGCCAAAGTTTGGGAATTGGGAAAATGACGATAATACGCCCTATACTGTATATTTTGAAAAAGCCAGGCAAACTCGTGGTACTGGAAAGATGATGAACCCCAATGATCCCGAAGAGAATCCAGATATGTTTCGTAATCTTGCTCCACCACCTGAAGTTGCTCCTCAATCCAAGCCTAAAAGACAAACAGAGGAACCACCAATTGGGCGTGGTGGACCAGCTAGGCAAACACGGGACCATAGACTAAGTAAAGAAGATGGTGAATTCCGCCAGTATGCTAATTCTCCAGCTCGTAAAGAGAGTGTGGGAAGGAAAGGTGCCAATGAGCCATCTCATCAACGTGGTCGTGGATCAAATTCTGGTAGAACTGGCAGACAAAGTATAGGATCTGAACATAGCTTTGATAAATCACCGCTGCATCCACATTACCAGGCAAAGGTTAGTAATGCTGGAAGAGGTGTTGCATCTCCTGCTTGGGAAGGAAAGAACAATTCTTATGATAGCAGTCACGGTACTCCTGGAAGGTCCAAAGTTAAGCAAGACAAATCTGATAGAGGGGCTGCAGTTCCAAGATTCGGAGAGTGGGACGAGAATGATCCTCAATCTGCTGACAACTACACACACATTTTCAACAAATTCCGAGAGGAAAAGCAAGGAAATCCATCAGGGACACCTAGTAGAACATCGAACAATACACAAAAGCATAACTCAGAGGAAAAGCAAAGGAAGTGGTGTTGTTGTCCCTGGTAATTATGCAAGGGAGGATCTTGATTTTATTCCAAAACAGCCAAGGGATGTGTAAATAGTTCAACAAATTACTTGTGCAATATATTAGAGTAATTCATTTATACTTTGTTCCCACAGTATTCTGCAATTGTATTGTCAACTTGTAGTCTTTAATATTGTACTTGTGTTTGTATGTTACAAACAGTGCTTGCAGATTTTTTATGCTTTCGCAATGTTGTATGTGTGAAGTCTAGTATTGTTGCTTGGTCTTTTCTGGCAATGCAAATGCTTATAATATTTGATTACTG
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc09g059430.2.1 | SL2.50ch09:54430654..54433345 | 255 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc09g059430.2 | SL2.50ch09:54430655..54433629 | 2,975 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc09g059430.2.1.1 | SL2.50ch09:54430655..54430660 | 6 | + | n/a |
| exon | exon:Solyc09g059430.2.1.2 | SL2.50ch09:54432287..54432841 | 555 | + | n/a |
| exon | exon:Solyc09g059430.2.1.3 | SL2.50ch09:54432923..54433102 | 180 | + | n/a |
| exon | exon:Solyc09g059430.2.1.4 | SL2.50ch09:54433322..54433629 | 308 | + | n/a |
| intron | intron:Solyc09g059430.2.1.1 | SL2.50ch09:54430661..54432286 | n/a | + | n/a |
| intron | intron:Solyc09g059430.2.1.2 | SL2.50ch09:54432842..54432922 | n/a | + | n/a |
| intron | intron:Solyc09g059430.2.1.3 | SL2.50ch09:54433103..54433321 | n/a | + | n/a |
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mRNA details
mRNA details

