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Solanum lycopersicum mRNA Solyc09g063010.2.1

mRNA details  
Name
Solyc09g063010.2.1
Type
mRNA
Length
2,003
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch09:60928454..60938553
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
10100
Nb exon
8
Sifter term
  • GO:0003700
  • GO:0010313
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g063010.2.1 BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

AGAAAGAAAGAGGAAAGTATTCATACCCAAAATTGCCCAACTTCTTGCTTTGCTCTCTGCTACTCAATCCATCGTCAGTCGTCTCTCCTTATTTAAACCACACAATAACAGTAAAAGGGTTTCAAAAAGCTACTTTCAGCTAACTCGGAGGTTGTTAAAGACGCTTTTAACAGTAGCAGCCTTTTCTGTGTGTGAGCTTTTGATTTATGGGCGGAGCTAATAAGCTCCAGTGTTATGGTGAGTTTGGGACTGCTTCTTGCGGCTGTGCCTGACCAATTTTGAATTATTTTTGCTTTTTTTTTTGGGAGATTTGAGCTGCCTACGTCACGATGAATCATTCTGTTCCTGATTTTGATATGGATGATGACTTCTCTCTTCCTGCTTCTTCTGGTATTACCAGAACTAAGAAGTCCGCAATGGCGGAAGAGGAAATCATGGAACTACTGTGGCAAAATGGTCAAGTGGTTATGCAGAGTCAAAATCAAAGATCTCTTAAGAAACCTCACATCGGTAACGGCAGTGGAGGTGGTGGTGATGCGGTTATTCCCTCTGACCAAGCTGTCAGTAGAGAGATCCGTCATGTAGAGGAAACTACTCCACATCATCTGTTTATGCAGGAGGACGAGATGGCCTCGTGGCTTCATTACCCACTCGATGACCCCTCCTTCGAACGTGATCTCTACTCCGATCTCCTATATCCCACGCCCACTTCTACCTTCACCACCGCCGCGCTGCCACGAGAAAACCGTACGTCTACGTTTGAGATCCGTCCACCTCCGCCACAACCATCGCCTGCAGCGCCGATCGGAACGGCTCCTCGACCGCCTATACCTCCTTCTAGGCGCACCGTCACAGAAAATTCAAATCGATTCCAGAACTTCGGACACTTCTCGCGATTGCCTAAAGCAAGGCTAGAACCTGGTCAGGCTAACTTAAGCAAGTCACCAAGAGATTCAACGGTCGTGGATTCAAACGTAACTCCAATTACAGGGCAGGAATCTAGAGTTACACTCATACCTGATAATGTGGTAGCAGTACCCGGCGGAAATGTAGGATGTAGTACAGTAAACGGCAGCACCGGAACTGCGACAGCGTCAACGGCAATTAGGGAACCGACGACTACATGTGATATTTCAATGACGTCATCTCCGGGTGGCTCAGGAAATAGTGTAAGCGCCAGTGCCGAACCACCAGCACCAGCACCAGCACCGTCGCATAAGGGGGCGGCACCAACGGCAACGGCAGCAGCGGATGATCGGAAACGGAAAGGGAGAGAAATGGAGGACGAAGGTCAGAATGAGGATGCTGAATTTGAGTCTCCTGATACGAAAAAGCAAGCACGCGGTTCAACATCCACAAAGAGATCTCGTGCTGCGGAGGTCCATAATCTTTCAGAAAGGAGACGTAGAGACAGAATAAATGAGAAGATGAAGGCCCTGCAGGAACTCATACCACGCTGTAACAAGACGGACAAAGCTTCAATGCTTGATGAGGCAATTGAGTATTTGAAATCACTACAATTGCAAGTGCAGATGATGTCCATGGGATGTGGCATGGTCCCGATGATGTATCCTGGAATGCAGCCGTACATGCCGCCAATGGGAATGGGCATGGGTATGGGGATGGGGATGGATATTGGCATGAACAGGCCAATGGTGCCATATCCACCTCTATTACCAGGTACAGCGATGCAGAATGCAGCTGCAGCAGCACAAATGGGTCCTAGATTTTCTATCCCTCAATTTCATTTGCCACCAGTTCCAGTACCAGATCCATCCAGAATGCAAGCCTCAAGTCAGCCAGATCCAATGCTAAATTCACTTGTTTCACATAATTCGAACCAGCCAAGACTTCCGAATTTTAGTGATCCATATCAGCAGTTTTTTGGTCTCCAGCAAGCGCAAGTTGCATTACCGCAGAATCAGGCAGTAGAACAGCCCAGTAATAGTAAATCCGGCAGCAGCAAAGAAGTTGGAAATCCAGGCAATCATCAATCTGGTTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g063010.2.1SL2.50ch09:60928453..60938224558-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g063010.2SL2.50ch09:60928454..6093855310,100-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g063010.2.1.1SL2.50ch09:60938136..60938553418-n/a
exonexon:Solyc09g063010.2.1.2SL2.50ch09:60937167..60938049883-1
exonexon:Solyc09g063010.2.1.3SL2.50ch09:60935029..6093512799-n/a
exonexon:Solyc09g063010.2.1.4SL2.50ch09:60934866..6093493166-n/a
exonexon:Solyc09g063010.2.1.5SL2.50ch09:60934694..6093475966-n/a
exonexon:Solyc09g063010.2.1.6SL2.50ch09:60929089..60929475387-n/a
exonexon:Solyc09g063010.2.1.7SL2.50ch09:60928588..6092866679-n/a
exonexon:Solyc09g063010.2.1.8SL2.50ch09:60928454..609284585-2
intronintron:Solyc09g063010.2.1.2SL2.50ch09:60938050..60938135n/a-n/a
intronintron:Solyc09g063010.2.1.3SL2.50ch09:60935128..60937166n/a-n/a
intronintron:Solyc09g063010.2.1.4SL2.50ch09:60934932..60935028n/a-n/a
intronintron:Solyc09g063010.2.1.5SL2.50ch09:60934760..60934865n/a-n/a
intronintron:Solyc09g063010.2.1.6SL2.50ch09:60929476..60934693n/a-n/a
intronintron:Solyc09g063010.2.1.7SL2.50ch09:60928667..60929088n/a-n/a
intronintron:Solyc09g063010.2.1.8SL2.50ch09:60928459..60928587n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17930991%2Fdetails feature 17930991
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