Solanum lycopersicum mRNA Solyc09g064370.2.1
![]() |
Name | Type |
Length
1,575
|
Organism |
Description
Alcohol dehydrogenase (AHRD V1 **** Q1HQD0_BOMMO); contains Interpro domain(s) IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
|
Location(s)
SL2.50ch09:61552580..61557226
|
Ontology term(s) |
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0008152
- GO:0016491
- GO:0055114
- Length
- 4647
- Nb exon
- 10
- Sifter term
- GO:0004024
![]() | spliced mRNA sequence, including UTRs |
>Solyc09g064370.2.1 Alcohol dehydrogenase (AHRD V1 **** Q1HQD0_BOMMO); contains Interpro domain(s) IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
GTATAAAGAATTGGATCTATTTGTAGAGTCATCCTCAAAAACACTATTTTTATTTTCTTTGATTCTGTGGTCTGTAAATCATGGCTACACAAGGTCAAGTCATCACCTGCAAAGCTGCGGTGGCCTGGGAACCCAACAAGCCCTTGGTGATTGAGGATGTGCAGGTGGCTCCACCGCAAGCCGGTGAAGTCCGGGTTAAAGTTTTGTATACTGCTCTCTGCCACACCGATGCTTATACCTGGAGTGGCAAGTTGAAGATCCTGAGGGTCTCTTCCCATGTGTTCTTGGTCATGAGGCTGCGGGGTACGATAGTAGAAAGTGTTGGTGAGGGAGTGACTGAGGTTCAGCCAGGAGACCATGTTATACCTTGCTACCAGGCAGAATGCAGAGAATGCAAGTTCTGCAAATCAGGAAAGACCAATCTTTGTGGTAAAGTAAGGGCTGCTACTGGAGTGGGAGTTATGATGAACGACCGTAAGAGTCGATTTTCTATCAATGGAAAACCGATCTATCATTTCATGGGAACTTCAACCTTCAGTCAGTACACTGTTGTCCATGATGTTAGTGTTGCAAAGATTGACCCAGTAGCTCCTCTGGAGAAAGTCTGCCTTCTTGGATGTGGTGTTCCAACTGGCCTTGGAGCTGTTTGGAACACTGCAAAAGTTGAACCAGGTTCCATTGTTGCCGTCTTTGGCCTGGGAACAGTTGGTCTTGCTGTGGCGGAGGGTGCAAAAGCTGCTGGTGCTTCACGAATTATTGGAATTGATATTGACAGCAAAAAGTTTGATAGAGCCAAAAATTTTGGTGTGACTGAATTCATTAATCCCAAGGAGCATGAGCAACCCATTCAGCAAGTCATTGTGGATCTTACTGATGGTGGTGTTGATTACAGTTTTGAGTGCATAGGAAATGTCTCTGTTATGAGGTCTGCTTTAGAGTGTTGTCACAAGGGTTGGGGAACCTCAGTGATTGTAGGTGTTGCTGCTTCTGGTCAGGAGATATCTACACGTCCATTTCAGCTGGTGACTGGTCGTGTTTGGAAGGGAACTGCTTTTGGTGGTTTCAAAAGCCGATCACAAGTTCCTTCCCTCGTGGACAAGTATTTAAAGAAGGAAATCAAGGTGGATGAATACATCACTCATAACATGACACTTGCGGACATAAACAAAGCTTTCGACCTGATGCATGACGGGGACTGCCTCCGTGTTGTCCTGGATATGTTTGTATGAATGAAGTCTGTAGGCTCTTTATGTTGCTTACTTTCTGTTTTTGTGCTATTTCTCAGAGACTATTTACCTTTCCCCTTGCTAATTATGTGTTGAATAAAAAGAAAGTGAGAAAAAAAGGATCAAGATGACAGATGAACTCTTTTTAAATGGATGGTAGTTTATTATCTTTTCAAGTAAAATGTTCTTACTTTGAAGGCTAAAACCATCATTACTGGTTTTAGAGTTTGGCATAAACCATTGCCATGTTTGCATAAATGGAATCCTCCCTTTTCCAAAGTAGTCAATTGGTCATATATATCTGCTGAAATATTGAGAAAATAAAGCTCAAAATAGTCACTTCTTTGGG
GTATAAAGAATTGGATCTATTTGTAGAGTCATCCTCAAAAACACTATTTTTATTTTCTTTGATTCTGTGGTCTGTAAATCATGGCTACACAAGGTCAAGTCATCACCTGCAAAGCTGCGGTGGCCTGGGAACCCAACAAGCCCTTGGTGATTGAGGATGTGCAGGTGGCTCCACCGCAAGCCGGTGAAGTCCGGGTTAAAGTTTTGTATACTGCTCTCTGCCACACCGATGCTTATACCTGGAGTGGCAAGTTGAAGATCCTGAGGGTCTCTTCCCATGTGTTCTTGGTCATGAGGCTGCGGGGTACGATAGTAGAAAGTGTTGGTGAGGGAGTGACTGAGGTTCAGCCAGGAGACCATGTTATACCTTGCTACCAGGCAGAATGCAGAGAATGCAAGTTCTGCAAATCAGGAAAGACCAATCTTTGTGGTAAAGTAAGGGCTGCTACTGGAGTGGGAGTTATGATGAACGACCGTAAGAGTCGATTTTCTATCAATGGAAAACCGATCTATCATTTCATGGGAACTTCAACCTTCAGTCAGTACACTGTTGTCCATGATGTTAGTGTTGCAAAGATTGACCCAGTAGCTCCTCTGGAGAAAGTCTGCCTTCTTGGATGTGGTGTTCCAACTGGCCTTGGAGCTGTTTGGAACACTGCAAAAGTTGAACCAGGTTCCATTGTTGCCGTCTTTGGCCTGGGAACAGTTGGTCTTGCTGTGGCGGAGGGTGCAAAAGCTGCTGGTGCTTCACGAATTATTGGAATTGATATTGACAGCAAAAAGTTTGATAGAGCCAAAAATTTTGGTGTGACTGAATTCATTAATCCCAAGGAGCATGAGCAACCCATTCAGCAAGTCATTGTGGATCTTACTGATGGTGGTGTTGATTACAGTTTTGAGTGCATAGGAAATGTCTCTGTTATGAGGTCTGCTTTAGAGTGTTGTCACAAGGGTTGGGGAACCTCAGTGATTGTAGGTGTTGCTGCTTCTGGTCAGGAGATATCTACACGTCCATTTCAGCTGGTGACTGGTCGTGTTTGGAAGGGAACTGCTTTTGGTGGTTTCAAAAGCCGATCACAAGTTCCTTCCCTCGTGGACAAGTATTTAAAGAAGGAAATCAAGGTGGATGAATACATCACTCATAACATGACACTTGCGGACATAAACAAAGCTTTCGACCTGATGCATGACGGGGACTGCCTCCGTGTTGTCCTGGATATGTTTGTATGAATGAAGTCTGTAGGCTCTTTATGTTGCTTACTTTCTGTTTTTGTGCTATTTCTCAGAGACTATTTACCTTTCCCCTTGCTAATTATGTGTTGAATAAAAAGAAAGTGAGAAAAAAAGGATCAAGATGACAGATGAACTCTTTTTAAATGGATGGTAGTTTATTATCTTTTCAAGTAAAATGTTCTTACTTTGAAGGCTAAAACCATCATTACTGGTTTTAGAGTTTGGCATAAACCATTGCCATGTTTGCATAAATGGAATCCTCCCTTTTCCAAAGTAGTCAATTGGTCATATATATCTGCTGAAATATTGAGAAAATAAAGCTCAAAATAGTCACTTCTTTGGG
![]() |
unprocessed genomic sequence underlying each location of this mRNA |
![]() |
Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc09g064370.2.1 | SL2.50ch09:61552659..61556880 | 383 | + | n/a |
Add items to a list:
Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc09g064370.2 | SL2.50ch09:61552580..61557226 | 4,647 | + | n/a |
Add items to a list:
Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc09g064370.2.1.1 | SL2.50ch09:61552580..61552693 | 114 | + | n/a |
exon | exon:Solyc09g064370.2.1.10 | SL2.50ch09:61556764..61557226 | 463 | + | n/a |
exon | exon:Solyc09g064370.2.1.2 | SL2.50ch09:61552830..61552966 | 137 | + | n/a |
exon | exon:Solyc09g064370.2.1.3 | SL2.50ch09:61553089..61553093 | 5 | + | 2 |
exon | exon:Solyc09g064370.2.1.4 | SL2.50ch09:61553409..61553459 | 51 | + | n/a |
exon | exon:Solyc09g064370.2.1.5 | SL2.50ch09:61553580..61553905 | 326 | + | 1 |
exon | exon:Solyc09g064370.2.1.6 | SL2.50ch09:61554658..61554740 | 83 | + | 1 |
exon | exon:Solyc09g064370.2.1.7 | SL2.50ch09:61554823..61554898 | 76 | + | 2 |
exon | exon:Solyc09g064370.2.1.8 | SL2.50ch09:61556129..61556286 | 158 | + | n/a |
exon | exon:Solyc09g064370.2.1.9 | SL2.50ch09:61556513..61556674 | 162 | + | 2 |
intron | intron:Solyc09g064370.2.1.1 | SL2.50ch09:61552694..61552829 | n/a | + | n/a |
intron | intron:Solyc09g064370.2.1.2 | SL2.50ch09:61552967..61553088 | n/a | + | n/a |
intron | intron:Solyc09g064370.2.1.3 | SL2.50ch09:61553094..61553408 | n/a | + | n/a |
intron | intron:Solyc09g064370.2.1.4 | SL2.50ch09:61553460..61553579 | n/a | + | n/a |
intron | intron:Solyc09g064370.2.1.5 | SL2.50ch09:61553906..61554657 | n/a | + | n/a |
intron | intron:Solyc09g064370.2.1.6 | SL2.50ch09:61554741..61554822 | n/a | + | n/a |
intron | intron:Solyc09g064370.2.1.7 | SL2.50ch09:61554899..61556128 | n/a | + | n/a |
intron | intron:Solyc09g064370.2.1.8 | SL2.50ch09:61556287..61556512 | n/a | + | n/a |
intron | intron:Solyc09g064370.2.1.9 | SL2.50ch09:61556675..61556763 | n/a | + | n/a |
Add items to a list:
Related views |
User comments |
Please wait, checking for comments. (If comments do not show up, access them here)