Solanum lycopersicum mRNA Solyc09g065100.1.1

mRNA details  
Name
Solyc09g065100.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc09g065100.1.1
Length
2,043
  
Description
Transcription factor (AHRD V1 *--* Q9M4A8_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH
Location(s)
SL2.50ch09:62949355..62956809
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
7455
Nb exon
8
Sifter term
  • GO:0005515
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g065100.1.1 Transcription factor (AHRD V1 *--* Q9M4A8_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH

ATGGAGATTATACAGCCTAATAGCCTGCAGTTACAAAACATGTTGCAAAATTCCGTCCAGTCGGTTAAATGGACTTATAGTATTTTTTGGCAATTTTGTCCAAAACAAGGGGTGTTAGTGTGGAGAGATGGATATTATAATGGAGCTATAAAGACTAGAAAAACTGTGCAGCCAATGGAAGTTACTGCTGAAGAAGCTTCTCTTCATAGAAGCCAACAACTTAGAGAACTTTATGATTCACTTTCTGCCGGTGACTCAAATCCCCCGGCGAGAAGGCCGTCCGCAGCATTGTCGCCGGAGGATTTGACGGAATCTGAGTGGTTTTATCTCATGTGTGTTTCTTTCTCTTTTCCTCCACCTATTGGATTACCAGGCAAGGCTTATTCAAAGAAACATCACATATGGATAATGGGAGCAAATGATGTTGATAGCAAAGTCTTCTGTAGAGCTATTCTTGCTAAGACTGTAGTTTGTATTCCTCTCTTGGACGGTGTTGTGGAACTCGGAACTATAGAAAAGGTTCAAGAAGATATTGGATTTATACATCGCGTAAAAAGTTTCTTCAATGAGCCACAACAAGCTCAGCCACCAAAGCCAGCTTTATCTGAGCACTCCACTTCGGATCCCGCCGCCTTTTCGGAGCCACATTTTTACTTCAGCAATACTCCGTCATCTGCGGGTATTTGTCCAGCGGATCAAGACGGTAGAATTACTGGAGAAGAAGAAAATGAGGACGAGGACGAGGACGAGGCTGAGGATGACGAGGATGAAAATGATGAAGCTGAATTAGACTCGGATGGTATAGCAATTCAAAGTGGGGCTGGAGCGGCTAATCCTATGGCGGCTGAGGCTAGTGAGCTCATGCAGCTTGATATGTCTGAAGCTATACGGCTCGGCTCACCGGATGATGGCTCTAATAATATGGACACTGATTTATATTTGGATGGTATTAGCCAAGCTGGAAATACGGCTGACTCTTTCAAAGCTGAGACTGCAATTAGTTGGGCTAACTTCCAAGACCTTCAACATTTACCAGGTATACCTAGTTATGATGAATTATCACAAGAAGATACACATTATTCTCAAACAGTTTCAGCTGTACTTGAACACCTCTCGAACACAAGTTCCAAGTTTGCCTCTTCTGCTACCATAATGGGCTCTATTTCTCCTGATTCAGCCCAATCCGCTTTCACATTATGGCCCGTCACTTGTAGCCCAAATCTCTCCCACTGTCGTCGCCACGATATCGGCGATGGCAGTGGGACCACCTCTCAATGGCTGCTCAAAAGCATACTATTCACTGTCCCATTTCTCCACAGTACTAAAAAATTATCAGAAGCTCTGTCTCCAAAGTCACGAGACGCTGCTGCGGCCGACTCTTCGGCCGCAGCGTCTCGATTCCGCAAAGGATGTACGATAAATAGTTGTACACAACAAGAAGAGACGAGCGGGAACCATGTACTAGCGGAACGACGTCGTAGAGAGAAGCTGAATGAGCGTTTTATTATTTTAAGGTCCTTGGTACCCTTCGTTACGAAAATGGATAAAGCATCGATACTTGGCGATACAATAGAGTATGTGAAGCAGTTACGTAAGAAAGTTCAGGATCTCGAAGCGCGTGATCGCCACACGGAAATTACCAAAAAATCAGATGAAAAGAGTGGTTCACCAATAGTAAAGGCGTTTCCGGTGAAGGGTAAGAGGAGAATGAAGAGTACGGTGGAGGGAAGTATAGTCGGAGCACCGGCAAAGATGACGGGTTCTCCACCGATGGAAGAGGAGGTTTTGCAAGTGGAAGTCTCGATCATCGAAAACGATGCACTGGTGGAGCTCCGGTGTCCGTACAAAGAAGGGTTGTTGTTAGATGTAATGCAAGTTCTAAGGGAACTAAAGGTGGAAGTTGTAGCAATCCAATCATCTCTTAGTACTGGACTCTTATTGGCTGAGTTAAGAGCTAAGGTAAAAGAAAATATATATGGAAGGAAGGCAAGCATATTGGAAGTGAAAAAGTCAATAAATCAGATAATCCCTAGAGTTAATTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g065100.1.1SL2.50ch09:62949354..62956809681+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g065100.1SL2.50ch09:62949355..629568097,455+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g065100.1.1.1SL2.50ch09:62949355..62949464110+n/a
exonexon:Solyc09g065100.1.1.2SL2.50ch09:62950280..62950534255+1
exonexon:Solyc09g065100.1.1.3SL2.50ch09:62952537..6295263397+1
exonexon:Solyc09g065100.1.1.4SL2.50ch09:62953649..6295370557+n/a
exonexon:Solyc09g065100.1.1.5SL2.50ch09:62953855..62954371517+n/a
exonexon:Solyc09g065100.1.1.6SL2.50ch09:62954820..62955434615+2
exonexon:Solyc09g065100.1.1.7SL2.50ch09:62956045..62956352308+2
exonexon:Solyc09g065100.1.1.8SL2.50ch09:62956726..6295680984+n/a
intronintron:Solyc09g065100.1.1.1SL2.50ch09:62949465..62950279n/a+n/a
intronintron:Solyc09g065100.1.1.2SL2.50ch09:62950535..62952536n/a+n/a
intronintron:Solyc09g065100.1.1.3SL2.50ch09:62952634..62953648n/a+n/a
intronintron:Solyc09g065100.1.1.4SL2.50ch09:62953706..62953854n/a+n/a
intronintron:Solyc09g065100.1.1.5SL2.50ch09:62954372..62954819n/a+n/a
intronintron:Solyc09g065100.1.1.6SL2.50ch09:62955435..62956044n/a+n/a
intronintron:Solyc09g065100.1.1.7SL2.50ch09:62956353..62956725n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17932144%2Fdetails feature 17932144
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