Solanum lycopersicum mRNA Solyc09g065640.2.1

mRNA details  
Name
Solyc09g065640.2.1
Type
mRNA
Length
3,399
Organism
Solanum lycopersicum
Description
Os11g0585900 protein (Fragment) (AHRD V1 **-- Q0IRY6_ORYSJ); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
Location(s)
SL2.50ch09:63812769..63819052
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005515
  • GO:0005488
Length
6284
Nb exon
5
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g065640.2.1 Os11g0585900 protein (Fragment) (AHRD V1 **-- Q0IRY6_ORYSJ); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical

AGAAAATATTAAGATTTTGTGGGTTTTGATGTGGCTATTCTAGGTTAATCTGTAAATTAGTTCTTCCCTGATAGGGGATTTTGTGTTATCAGTTTTGAACTGTGATTTTCATCTTAACAAAATCAGGTCCTTACCCGGACCTCGTACATAGCTTTAGTGCTTATTTTTTGATCTCAACAAGTTCAGAGTCTTGTGATTCTGAGTGTGAGAGAGCTGTTGTATTATTTTGGTTTGCTGTTTAAGTTTTGGATTGTCGGGTAGAACCCTTGTGGCTACTGTGGAGATCTGGGACTTGCTTAATCTGTTATGTCCCATGAGAACTTTTTTCCCTTCAGAGTCTTGTAAAGAAACACATCTGAAATCAATTAATCCTCAGTCATGGCTCCAAGTTGAAAGAGGGAAGCTTGCCAAAATTTCATCTGAATCTGCTTCTTCTATAGATTCTTTGATCAAGGTCCCAGAACCACCAATTCTTCCATTCTTTAAACCTGTTGATTATGTTCAAGTTTTAGCAAAAATCCATGAAGAGCTTGAATCATGTTCCCCACAAGAGAGATCAAATCTCTATTTGCTGCAGTTTCAGGTCTTTAAGGGCCTCGGAGAAGTTAAATTAATGAGGAGAAGCCTTCGCGCAGCTTGGTCGAAAGCAAGTACAGTTTATGAAAAACTTGTATTTGGGGCGTGGTTGAAATACGAGAAGCAAGATGAAGAGCTCATCTCTGACTTGCTTTCTAGTTGTGGCAAGTGCGCAAAGGAGTTTGGAGCAATAGACATAGCATCTGAAATGCCTGCCTATAAGAAATTAAGTTCTCATGGAGTCATCACCACAAATGAGGATTCTTGTCCAAGAACTGTTTCTTTTAGAATTGCGGATGAGAAAATAGCATGTGACAGGCAGAAAATTGCCAGCCTTTCAGCTCCATTTCATACCATGCTCAATGGCTGTTTCACAGAATCATTTTGTGAGGAAATAGATTTGTCTGAAAACAATATTTCACCCCTGGCAATGAGATTGATCAATGAATTCAGCTCAACCGGTTTATTGAATGAAGTGTCCCCTGATCTGCTGTTGGAAATATTGGTATTTGCCAATAAGTTTTGTTGTGAAAGCCTCAAGGATGCTTGTGACCGAAAGCTCGCGTCTTTAATTTCATGTCGACAAGATGCTCTAGAACTCCTTGAATGTGCCCTTGAAGAGAACTCCCCTGTCCTTGCTGCGTCATGTTTGCAAGTATTTTTACGTGAACTCCCAGATTCTCTGAAAGACAGTCAAGTAGTTGAACTGTTAAGCAATACTACCAGGCAACAAAGGTCAATTATGATAGGTCCTGCCTCATTTTCACTCTATTGTTTGTTAAGTGAAGTTTCGATGAACCTTGATCCTAGATCAGATGAATCTGTTCGTTTTTTGAGAACACTGGTAGATTCAGCTGAAACCAGCCAACAGAAAATGGTCGCATATCATCGGTTAGGATGCGTTAAATTTCTTAGGGAAGAGCTTGATGAAGCTGAGCAACTGTTTGAGGCTGCTTTTAATTTGGGTCACACTTATTCAGTTATTGGTTTGGCTAGATTAGGTCAAATAAGGGGTCATAAACGCTGGGCATATGAGAAGCTCGGTTCTGTTATTTCTTCCTCAATTCCTCTTGGATGGATGTACCAAGAGAGCTCGCTATATTGTGAAGGAGAAAAGAGGTGGGATGACCTTGAAAAAGCAACTGAGCTTGATCCTACACTGACATACCCCTATATGTATCGAGCTGCATCCTTGATGAGGAAGCAAAATGCTCAAGCTGCTCTTTCAGAAATAAACAGAATCCTTGGATTCAAACTGGCATTGGAGTGCTTGGAACTCCGCTTTTGTTTTTACCTTGCTCTAGAGGATTACCAATTAGCAATATGTGATATACAGGCAATCCTCACACTTTGCCCAGATTATCGCGTGTTTGAAGGACGAGTTGCAGCATCGCAACTCCGTACTCTGCTGCGCGAGCATGTAGAGAATTGGACAGAAGCTGATTGTTGGCTGCAGTTGTATGATAGATGGTCGTCAGTTGATGATATTGGATCTCTTTCAGTAATATACCAGATGCTCGAGTCTGATGCAGCAAAAGGTGTTCTTTACTTCAGACAGTCCCTGCTTCTCCTCCGATTGAATTGTCCAGATGCAGCCATGAGGAGTTTACAGTTGGCTCGCCAGCATTCATCTAGTGAACATGAACGTCTGGTTTATGAGGGATGGATCTTATATGATACTGGACACTGTGAAGAAGGTCTACAGAAAGCAGAAGAGTCCATTAGCATCAAGAGATCTTTTGAAGCATTCTTCCTGAAAGCGTATGCTTTAGCTGACTCTAGCCTTGATGCATCTTGTTCATCAACTGTCATATCACTTCTTGAGGATGCCTTGCGATGCCCTTCAGATAGGCTTCGCAAAGGTCAGGCCCTGAACAATCTTGGCAGTGTGTATGTCGACTGCGGTAAATTGGATGCTGCAGCTGATTGCTACATTAATGCCCTTAAAATCCGGCATACCCGGGCTCACCAAGGTCTTGCTCGTGTACATTTCTTGAGAAATGATAAGGTGGCTGCTTATGATGAAATGACCAAACTGATTGAGAAGGCCAAGAATAATGCATCTGCCTACGAGAAGAGATCAGAATACTGTGACCGTGACCGCACAAAGGCTGACCTAGAGATGGTCACTCGTCTAGATCCTCTTAGAGTTTACCCTTACAGATATCGAGCTGCAGTTCTGATGGACAACCACAAGGACAAGGAAGCCATTGAAGAACTTTCGAGGGCCATTGCATTTAAAGCCGATCTTCATCTTTTACACCTGCGAGCTGCTTTTCATGAGCATATAGGTGATGTTATGGGTGCATTGCGAGATTGTCGAGCTGCTCTCTCTGTCGACCCAAAACATCAAGAAATGTTGGAACTTCATAGTCGTGTGAACAGTCAAGAACCTTGAAAGAAATGACTAATGAGCAACAAGACAATATATGCAAGGACAATAGGAGGGGGAAACTTGTGTCTCTTATTTGAGGACACAAAAGTGTAAAATTAATTGAGAAAGACTTTTCTCCCTTTTTCCTTTTTTCTACCTCCATTGGATGCCACAAGCATCTCCTTGTTTATCTTAGTTCCAAAATTTTGTAATATGCTCCAAAATTCTGTTAATATTATTTATATTAATGAAAATCTTTATTCTCTCTAGAATTATTTGTTAACTAGTTTCTAGGTACGTGTGTTTGCACGTGTGTCATGTGTTAATTAGCAGTATTGAGTAACTAAATTTTGAAAGAGAAGTATAATTGTTTGTACTTATATACAATCAATTGAATTGGTCTATATATGTGATATTTTTTATACAGTTCTAATATATCTTATACTTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g065640.2.1SL2.50ch09:63813081..63818627887+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g065640.2SL2.50ch09:63812769..638190526,284+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g065640.2.1.1SL2.50ch09:63812769..63813206438+n/a
exonexon:Solyc09g065640.2.1.2SL2.50ch09:63813312..638150241,713+n/a
exonexon:Solyc09g065640.2.1.3SL2.50ch09:63816910..63817201292+1
exonexon:Solyc09g065640.2.1.4SL2.50ch09:63817653..63817962310+1
exonexon:Solyc09g065640.2.1.5SL2.50ch09:63818407..63819052646+n/a
intronintron:Solyc09g065640.2.1.1SL2.50ch09:63813207..63813311n/a+n/a
intronintron:Solyc09g065640.2.1.2SL2.50ch09:63815025..63816909n/a+n/a
intronintron:Solyc09g065640.2.1.3SL2.50ch09:63817202..63817652n/a+n/a
intronintron:Solyc09g065640.2.1.4SL2.50ch09:63817963..63818406n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17932725%2Fdetails feature 17932725
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