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Solanum lycopersicum mRNA Solyc09g065720.2.1

mRNA details  
Name
Solyc09g065720.2.1
Type
mRNA
Length
2,273
Organism
Solanum lycopersicum
Description
Peptidyl-prolyl cis-trans isomerase (AHRD V1 *-*- B9H8E5_POPTR); contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
Location(s)
SL2.50ch09:64010400..64015940
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006457
Length
5541
Nb exon
13
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g065720.2.1 Peptidyl-prolyl cis-trans isomerase (AHRD V1 *-*- B9H8E5_POPTR); contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type

ATGAGTAAGAAGAAAAACCCTCTTGTATTCTTAGATGTATCAGTTGATGGAGATGCTGCAGAAAAAATTGTTATTGAGCTCTTTGCAGATACTGTTCCAAGAACTGCAGAAAATTTCCGGTCGCTCTGCACAGGTGAGAAGGGAGTTGGAGTATCTACTGGAAAACCTCTGCACTACAAAGGATGCTTATTTCACCGTGTAATAAAAGGGTTTATGGCACAAGGTGGTGATTTCTCCAAAGGGAATGGCACTGGTGGAGAGAGTATATATGGAGGGAAATTTCCAGATGAGAACTTCAAAGTTGCCCACGCGGAGGCTGGTCTTCTCTCAATGGCAAATAGTGGTCCTAATACAAATGGATCCCAGTTCTTCATTATATTTAAGAGAACTCCCCATCTCGACGGGAAGCATGTTGTTTTTGGAAAAGTTGTAAAGGGAATGGATTTAGTGAAGAAAATTGAACAGCTGGGAACAGACAGTGGGAAGCCATCTGGGCTTGTGAAAATTGTGGATTGTGGCGAACTGTCTGAGAAGAAAAGTAATGATACACCCAAAGCAGAGAAAGGGAAAAATAAGAAGTCCGCGAGAGCTCTTTCCTCTGATGATGATTCAGACAGTCAAGAAAAGGGGAAAAGCAAATCATCCACCAATAGAAGGAAAAAGAAAAAGAGGAGATACTCTTCATCTGATTCTTACAGTTCTGAGACAGATACTGATTCCTCTTCAGACTCTGATTCAGATTCTAAGCTGGACTCCTATTCTTCTAGTTCTTCAGGTGATGAAAGGCGTAAGAAGAGGAAGAGGTCAACTAAGAAAGAAAGGAGTCGACATGGGAAGAAAAAAGGTAGAAAAAGCACGAGCAGAAGAGTTGATCGAAATAAAAGATCGAGACGCAAGTGGAGCTCTGAGAGTTCTAGTGACACAGACAGTCAGAGCATGAGCAGCAGCAGCAGCGGTGATAGCTCTGATGATGAAAATGACAGGCCAAATAATTCTGCACGAAAAGGTTTGGTGAAGAAATTGTCAAACCCTGTCAAAGGACAAGCTGTTTTGAAGCAGCAACAGAATCTTGAAGAGGGTGAAGTGTCTAAGAACGCTAAGCTTCCAAATAATGGTCATGGTGGAGATGTACAAAACGACAGGACTCTCTCCACAAATCATCAATCTGATAATTCGAGCAGATCCAGGAGCACAACACCAAGTCCTAAGGGGAAGCCAAGACCGAGCGGCAGGAGCAGTCGAAGTATGAGCCCAGAAAAAGTACCTGGTAGACTTGGTCAAAATGGTGCAAGTCTTCCAATTGAATCAAAGGAGAGAAGTCTTTCAAAAAGTCCTCCTCCAAAAGCTACTCAGCCATCTCGCTCTAGTCCTGTCAGGGATTTATCCAGAAATCATTCTCCAGATGGAACTTCAAAACGAGTCCGTAAAGGTCGTGGCTTCACTGATCGTTATTCATTTGCAAGACGCTATCGCACCCCATCTCCTGAACGTTCATCTTACAGGCCTTATTACCAGGGTGGGAGAAACTTTCAGGGGAATCGTGATAGGTACTCAAGCTATAGAAGCTATTCTGGTCGCTCTCCACAGGTACAGTACAGACGGTCACCAAGAGGCAGAAGTCCCCCCAGATACCAGCGCAGGAGTCGAAGTAGGAGTGTTTCTCGCAGCCCTAGGCGTGAGAGTCGTCGATGTAGGAGCCCTTCACGCAGTCCTTCCCCTAGAGAAAAGCGGCAGCCAATCAGTGACAGATTGAAGTCTCGTCTTGGGCCTCGTGTAGATGATCAGCATTCTATTCCAACTAGGAGGTCAGCCTCAAGATCTAGAAGCCGCGACTCTACTACTCCTCGATCCCCTTCTGCTGCTCCAAGGAAGCACAGTAGGAAAGTAGGATCCGCATCACCTAATAGTTCGAGATCAACCTCCCCACCTCGACCGAGGGGTCTAGTCTCATATGAGGATATCAGTCCCTGTGGGACAAACTAATCTCTGTACCCTCCATGCTCATATATGAGTGACTAAATTTGCAGAGAACTTTTGGCCTAGGTTTAAACCTTGTTCCATCAGATGTTCGCTTAGCTGGGATTTCCAACTCAATTTTATCATTTTGTGTTTCAGTAAACTAGCAGTTCGACATTGAATGTTTTACTTATGGAAAAAGGGTCTCATTTAGCCTCGTACTATAAAAAAAAGGTTATTTCTCAATAGTTGAGATATCGAGTTGGCGTTGGGTTCGTATACAAAGTTTTGAAGTTATAAATCATTTCTGTTGATTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g065720.2.1SL2.50ch09:64010399..64015650661+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g065720.2SL2.50ch09:64010400..640159405,541+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g065720.2.1.1SL2.50ch09:64010400..6401047778+n/a
exonexon:Solyc09g065720.2.1.10SL2.50ch09:64014284..64014464181+2
exonexon:Solyc09g065720.2.1.11SL2.50ch09:64014578..64014937360+1
exonexon:Solyc09g065720.2.1.12SL2.50ch09:64015020..6401510081+1
exonexon:Solyc09g065720.2.1.13SL2.50ch09:64015296..64015940645+1
exonexon:Solyc09g065720.2.1.2SL2.50ch09:64010623..6401067755+n/a
exonexon:Solyc09g065720.2.1.3SL2.50ch09:64012190..6401227889+2
exonexon:Solyc09g065720.2.1.4SL2.50ch09:64012845..6401286925+n/a
exonexon:Solyc09g065720.2.1.5SL2.50ch09:64012976..6401301439+2
exonexon:Solyc09g065720.2.1.6SL2.50ch09:64013095..64013212118+2
exonexon:Solyc09g065720.2.1.7SL2.50ch09:64013393..64013553161+1
exonexon:Solyc09g065720.2.1.8SL2.50ch09:64013670..64014003334+2
exonexon:Solyc09g065720.2.1.9SL2.50ch09:64014091..64014197107+1
intronintron:Solyc09g065720.2.1.1SL2.50ch09:64010478..64010622n/a+n/a
intronintron:Solyc09g065720.2.1.10SL2.50ch09:64014465..64014577n/a+n/a
intronintron:Solyc09g065720.2.1.11SL2.50ch09:64014938..64015019n/a+n/a
intronintron:Solyc09g065720.2.1.12SL2.50ch09:64015101..64015295n/a+n/a
intronintron:Solyc09g065720.2.1.2SL2.50ch09:64010678..64012189n/a+n/a
intronintron:Solyc09g065720.2.1.3SL2.50ch09:64012279..64012844n/a+n/a
intronintron:Solyc09g065720.2.1.4SL2.50ch09:64012870..64012975n/a+n/a
intronintron:Solyc09g065720.2.1.5SL2.50ch09:64013015..64013094n/a+n/a
intronintron:Solyc09g065720.2.1.6SL2.50ch09:64013213..64013392n/a+n/a
intronintron:Solyc09g065720.2.1.7SL2.50ch09:64013554..64013669n/a+n/a
intronintron:Solyc09g065720.2.1.8SL2.50ch09:64014004..64014090n/a+n/a
intronintron:Solyc09g065720.2.1.9SL2.50ch09:64014198..64014283n/a+n/a
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