Solanum lycopersicum mRNA Solyc09g065820.2.1

mRNA details  
Name
Solyc09g065820.2.1
Type
mRNA
Length
1,433
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** B6U846_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch09:64095481..64100029
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4549
Nb exon
6
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g065820.2.1 BHLH transcription factor (AHRD V1 *-** B6U846_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

TGAAGCAAACAATATATTTAAGCAAAGCTTTAGGTGACTCCCTTTCCTTTATTTTCTTCATGGCTCTCACTGCTCTTTAGAAAGTAGCAAAACACACACACAAACAACCCAAAACACACACTTCCATTTCCATTTTTTGCCTATATATATATATATATATGTAACAAGTACTTGTTAGAGTACTAATTTGTACACCCTCTTATCAATTCCGTTGTAAAGAACACTTTTTTAACTAGTATTTGTTCAATTGAATGCTTTTCTGAGGAATTAAGGTGGTCGAAAACAGCTCCGATCCAAGAAAGATTGAATCTTTATAGTTTCTGCTATGGCTAACAACCCTTCTGAGGGACCTTCTGATGATTTCTTTGACCAAATCTTGGGATTTCCTGCTTACAATGGAGCAGAACCTAATTTGGCGGGAAATGATGCCGGAGCTATACCGCCGGCGATGATGCTCCAGCTTAACTCTGGTGATGGGTCAAGTCAGTTTACTGGAGTGGGTCTTGGGGTTGGTTTAGGTGGTGGGGGGTTCCATGGTCATGGTGGGGGTGGTTCTTTTCCTTTAGGGTTGAGTTTAGAACAAGGGAAAGGTGGGTTCTTGAAGATGGATGATGTTTCAGCACCTGGAAGGAGGTTTAGAGATGATGTTGTTGATAGCAGAGCTTCTTCTTCTGTCAAACCTGGTTTTCATGGACAACCGATGCCTTCAATGCCGCATCCCCCTGCAATACGTCCAAGGGTGAGAGCTAGGCGAGGACAAGCTACTGATCCACATAGCATAGCGGAGAGGTTACGTAGAGAGAGGATAGCAGAAAGAATTAGAGCATTGCAAGAGTTGGTTCCCAGTGTCAATAAGACTGATAGAGCTGTAATGCTTGATGAAATTGTAGATTATATCAAATTCCTACGGCTGCAAGTGAAGGTGTTGAGCATGAGTAGGTTAGGAGGAGCTGGTGCAGTAGCACCACTTGTTACAGACATTCCAATATCATCAGTAGAGGAAGAGAGCAGTGAAGGTGGAAATAATAACCAACCAGCTTGGGAAAAGTGGTCAAGTGATGGCACAGAAAGGCAAGTGGCTAAACTCATGGAAGAAAATGTTGGTGCTGCAATGCAATTTCTTCAGTCTAAAGCACTATGTATAATGCCTATTTCTCTTGCATCAGCAATTTATCACTCTCAGCCACCAGATACATCAAGTCTTGTTAAGCCAGAAACAAATCCTCCTTCATAGATGAACACCCTTATAGAAAAAGGTGACATAACATGCTAATGACCTTAAAGAATTTTCTTGCAGTGGATGGTTCCTACTTTTATCTATTCAAGTAATATTTAGCTTTTTGTTGAAAAAACAGGGTTCTTTTTTAAAAATATTTATGTATAAAGTAAACCATTTTCTATCATTTATATATTTGAGTAGTTTTGTTCTTCGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g065820.2.1SL2.50ch09:64095805..64099830303+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g065820.2SL2.50ch09:64095481..641000294,549+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g065820.2.1.1SL2.50ch09:64095481..64096162682+n/a
exonexon:Solyc09g065820.2.1.2SL2.50ch09:64096895..64097002108+n/a
exonexon:Solyc09g065820.2.1.3SL2.50ch09:64097452..6409751766+n/a
exonexon:Solyc09g065820.2.1.4SL2.50ch09:64098669..6409873466+n/a
exonexon:Solyc09g065820.2.1.5SL2.50ch09:64099421..6409949878+n/a
exonexon:Solyc09g065820.2.1.6SL2.50ch09:64099597..64100029433+n/a
intronintron:Solyc09g065820.2.1.1SL2.50ch09:64096163..64096894n/a+n/a
intronintron:Solyc09g065820.2.1.2SL2.50ch09:64097003..64097451n/a+n/a
intronintron:Solyc09g065820.2.1.3SL2.50ch09:64097518..64098668n/a+n/a
intronintron:Solyc09g065820.2.1.4SL2.50ch09:64098735..64099420n/a+n/a
intronintron:Solyc09g065820.2.1.5SL2.50ch09:64099499..64099596n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17932987%2Fdetails feature 17932987
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