Solanum lycopersicum mRNA Solyc09g083220.2.1

mRNA details  
Name
Solyc09g083220.2.1
Type
mRNA
Length
1,488
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** B6U846_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch09:68883768..68887817
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4050
Nb exon
7
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g083220.2.1 BHLH transcription factor (AHRD V1 *-** B6U846_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

TGCCACAAAGCACGAAAGACAAACAGAGACATTCCATTTCAGTTCCTCAAAACCCTTAACTTCTTCTCGCCGGGAAAAAAATTAATTTCGCCGGATAAATCTCCGGCATGGCAGCAAACCAACCGGAAGGCTATGCCGACGATTTCCTCGAGCAAATTCTCGCTATTCCTCCCTACTCTGGCTTGCCGGTTGCTGATGTTGGCACTCCATCAGAGACGACGTCGTTTACCTCGGCGTCTGCCGTATCTCATCTTAACTCTGCCGCTGCTGCTGGCCTACAGCAACCTTTGTTTCCGCTGGGATTAAGCTTGGATAACGGCCGTGATGACGTCGGCGATGCAGGTCCTTATGCAGTGAAGCATGAAAGAGATGGAATGAATATCGGAAATCTATATGCAGGTCTAGAACACTTGCAATCTCATGCAGTTCGTCACTCTGTGCCTTCTGTTCACCATGTCCAGCCTTTTCAAGGCCCACCAACAACGAGCACAACAGTAACTGTGCCACACCCACCTTCAATTCGTCCTAGGGTTCGAGCTCGGAGGGGACAAGCCACAGATCCACATAGCATTGCTGAGAGGCTGAGAAGAGAGAGGATATCAGAAAGAATAAAGGCTTTGCAGGAACTGGTACCCAGCTGCAATAAGACAGATAGGGCCGCAATGCTTGATGAGATTCTGGACTATGTGAAGTTCTTAAGGCTTCAAGTTAAGGTACTGAGCATGAGTAGGCTGGGAGGAGCCAGTGCAGTGGCACAACTTGTTGCTGACATTCCATTACAATCTGTGGAGGGGGACAGTGGTGAAAGTAGATCCAACCAGCATATATGGGATAAGTGGTCCAATGTTGACACAGAACGAGAGGTTGCTAAGCTCATGGAGGAAGACGTCGGTGCAGCCATGCAATACCTTCAGTCTAAATCACTCTGCATCATGCCCATATCACTTGCTGCACTCATCTATCCTACTCAACAACCGGATGACCAGTCCCTGGTCAAGCCTGAAGCAGCAGCCCCATCATAGACCTTCAATTCGTTGCACGTGCCTCTAAGAACTCCCAATAGCCTTGTGTCCCCCCTCCTTTGTATCCTTACCTACCATCCATTTGTATTTTCCTGTGTAATTGGTGGCAATGCAATCAATGTCAGATGCCACAACTTTTGCTTTTATCCCAACCATTGGCCCTTTTTTTTAATTACCTTTCTGGAGTTTCGTCAAACAAGGCATGATGTCATCGTAGCTTGAAGAAAGGTAAACGTATGAAAGCACCCAATCAATTAGCATCATTTTCGGATGAGGTGAGTTTCTTTTTCAAAGTTATCTATGATTAGCTGCTCTTCTTCCACCATTTTGTTGTGGGATTGTGGGGACTCCCTTTATCCTTTGCATAGTGGATGGTGGGGCTTTGTAAAAGTAACCAACTGGTTGTTGTAAAGTATATTGTAATTTTAGTATATTATTGTAATGGGTAGTTGAAGTTGCTCTCCCT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g083220.2.1SL2.50ch09:68883874..68887351305+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g083220.2SL2.50ch09:68883768..688878174,050+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g083220.2.1.1SL2.50ch09:68883768..68884129362+n/a
exonexon:Solyc09g083220.2.1.2SL2.50ch09:68884223..6888432199+n/a
exonexon:Solyc09g083220.2.1.3SL2.50ch09:68885236..68885355120+n/a
exonexon:Solyc09g083220.2.1.4SL2.50ch09:68885460..6888552566+n/a
exonexon:Solyc09g083220.2.1.5SL2.50ch09:68885886..6888595166+n/a
exonexon:Solyc09g083220.2.1.6SL2.50ch09:68886939..6888701678+n/a
exonexon:Solyc09g083220.2.1.7SL2.50ch09:68887121..68887817697+n/a
intronintron:Solyc09g083220.2.1.1SL2.50ch09:68884130..68884222n/a+n/a
intronintron:Solyc09g083220.2.1.2SL2.50ch09:68884322..68885235n/a+n/a
intronintron:Solyc09g083220.2.1.3SL2.50ch09:68885356..68885459n/a+n/a
intronintron:Solyc09g083220.2.1.4SL2.50ch09:68885526..68885885n/a+n/a
intronintron:Solyc09g083220.2.1.5SL2.50ch09:68885952..68886938n/a+n/a
intronintron:Solyc09g083220.2.1.6SL2.50ch09:68887017..68887120n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17937708%2Fdetails feature 17937708
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