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Solanum lycopersicum mRNA Solyc09g083360.2.1

mRNA details  
Name
Solyc09g083360.2.1
Type
mRNA
Length
1,514
Organism
Solanum lycopersicum
Description
Basic helix-loop-helix protein (AHRD V1 ***- Q0KK48_TOBAC); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch09:69021315..69023760
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2446
Nb exon
3
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g083360.2.1 Basic helix-loop-helix protein (AHRD V1 ***- Q0KK48_TOBAC); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATTGTCATTAGAAAAATAACCAAATTTTAAAGAAGAAAAGGCTAGGATGGAAGAGTTCTTTCAAGTTTCTTGGTTTTGTGATGATGAAAATGAAACTAATAATAATTTTGTGGTGAACCAAAGTGCTTTTGTGAGTTTTGGGAGCAAATCAAATGAAGGATTTGGAGTTTCTAGCTATGGAAATGTATCGATGAATCATCGAAACATGAACAAGAGGATGATTGAGTTCTTGAAGAAGAATTGGAGTCCCAAAAATGGACAAGTGAAGATAGAAAAAGAGAAAGTTCATAAACATATGATTAAAGAGAGGATTAGAAGAGAAAAACAAAAGCAAAGTTATTTGAACTTGTACAAATTGCTTCCAATGGGTACCAAGAATGAGAAAAATGCTATAGTCCAAACAGCAACAAGGAGAATTGAAGAGCTACAAAAATACAAGGAAAATTTAGAGAAGAGAAATGATGAAATTCAATTGATTTTAGCACAAAGTGATAAAAAAGAGGAGGAATTTGAGAAGGCTAAAATCAAAGCAAAAGTTGGTAATCCAATTTGTGGTGTAGATTCAATGCTAGAGGTTCTCAAGTGTTTGAGGAATTGTGAAACCAAGGCAAATTCCATTCAATCAAGTTTCTCTCACCAAGAATTTTCAACATTGATTGAAATAGAAACTAAGAGTGGAGCAGCAGAGATAGAAAAAGCAGTACAAAATACTCTATTTGAAGTTGAAAGGAACCTTCGTGCCCATTGATAATTTTAGGCCACACAAAAATTATGCAACTTGTGCTCATCAACAAATTTTAATTTGGTGTCTCCATTTGACCAATTTATCTACAAAATTAACTTTCCCTTCTTTTACCTCCTAATTTTATTTTATGTCATCACAAATAATTAAAGGTTAAATATATTTAATCAGATATCTTTTATGGTCTTTCATTTTGATCCATGACGATTAGATTTTCGACTTAACCAATAAAAATAATCACAACTTTTACAACAATTTGGTGGGACATGAAGAACAAAGATAGTAACATACCCATGGTAATTCCACTCGAGTAATTCCACGAGTGGAATATGAGGATGGTAGAGTCAAGAGTACATTATAATTTTTACTGATCCATCAGTGATATTCAGCAAAAGCACAAGAGTTCTACAGCAAAAACTGGTTTAAGTGACACATTATCTCACATCAAAATTGTTAAAGAAAGGCGTTGATGAGGCTAGAACAGGAAAAATAGACATAGGTGAGGAAATCACTTGAGCGGAATGAACCTTGACGAGTGAGTAGCACCAATACCAGGTCTACCGTGCTTGACAGGTTTGTATGAGATAGAGAACTCGGCCAGATAGTGGCCGATCATCTCAGGCTTGACTTCAATCTGATTGAAGGTTTTACCATTGTAAATTCCGATAACACTTCCAATCATTTCAGGAAAGATGATCATGTTCCTAAGGTGAGTCTTGACAGGCTCTGGCTTTTCACCTTGTGGAGCCTCGCGTTTCTGCAACAAAAAAAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g083360.2.1SL2.50ch09:69021360..69022994234+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g083360.2SL2.50ch09:69021315..690237602,446+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g083360.2.1.1SL2.50ch09:69021315..69021690376+n/a
exonexon:Solyc09g083360.2.1.2SL2.50ch09:69021867..69022163297+n/a
exonexon:Solyc09g083360.2.1.3SL2.50ch09:69022920..69023760841+n/a
intronintron:Solyc09g083360.2.1.1SL2.50ch09:69021691..69021866n/a+n/a
intronintron:Solyc09g083360.2.1.2SL2.50ch09:69022164..69022919n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17937892%2Fdetails feature 17937892
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