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Solanum lycopersicum mRNA Solyc09g089870.2.1

mRNA details  
Name
Solyc09g089870.2.1
Type
mRNA
Length
1,003
Organism
Solanum lycopersicum
Description
Transcription factor (AHRD V1 **** D6MKE6_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch09:69490850..69495611
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4762
Nb exon
6
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g089870.2.1 Transcription factor (AHRD V1 **** D6MKE6_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

TAATCCTTTGAAAAACTTTTTCTATTAAATTTTATCCAAATTCGGTTTAGTTTTGATTCGATTTGTCTAATTTTTCCTTTTTGTTGGTTTGATTTATCGAAATGGATCGATTTGATTCATTTCGAGATGCCAATTGGGACCTAATTGATTTCAATAGCTTTATAGATGAAGAATCGCCGATAGATTTCTTTTGGAACGATCAAACCCAGGATTTGAGTGCTGTAGCAGAAGTCGAGGCACCTCTCAGCAGTGCTGCATTACAGGAGTGCATAGAAACAGAATGCCCTCGGAAAAGAGGTCGTAATGAGTCTTGCAGCAAACAAGGGAACAAAGCTTGCCGTGAGAGATTAAGAAGGGAAAAATTGAATGAAAGGTTTTCAGACTTATGCTCTGTTCTGGAACCCGGGAGACCTGTAAAAACAGACAAAATGGCCATACTTGGTGATGCCATTCGTGTTCTAAACCAGCTGAAGACTGAATCTGAGGAATACAAAGAGATGAACCAAAAGCTTATGGAAGAGATTAAGACTTTGAAGGAAGAGAAGAATGAACTTCGTGAAGAGAAACTTGCACTGAGGGCTGACAAAGAGAGGATGGAGCAAGAGTTGAAAGCTACAGCTTCTCCAGCAAGTTTTATTCCCCCTCATCCAGCAGCATATCAGCCGGCTGTAAATAAGATGGCCGTTTTCCCTAGTTATGGTTATGTGCCAATGTGGCAGTATCTACAACCATCTTCGCGGGACACATCTCAAGATCATGAGCTCAGACCTCCTGCTGCTTGAAAATCTTGCAAGATAATGGAGGAACATGTATGGCAGAGAATTTCTCTAGATGGAATTGGATTTGATTTACATCTGCTGCGTTTAGCTCCTGCATTTTTGTTTGTCTCTTGCAATAGGTAGACATTCTAGTTTTTCTGTATCCAAACTATGTGGTACTACTTATTTATGAGCATTTATGGATTCTTTATGATGCTGCAGCCGAGGGAATTTCAATCCCAGGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g089870.2.1SL2.50ch09:69491187..69495510227-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g089870.2SL2.50ch09:69490850..694956114,762-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g089870.2.1.1SL2.50ch09:69495395..69495611217-1
exonexon:Solyc09g089870.2.1.2SL2.50ch09:69493198..6949327578-1
exonexon:Solyc09g089870.2.1.3SL2.50ch09:69492208..6949228578-1
exonexon:Solyc09g089870.2.1.4SL2.50ch09:69491601..69491763163-n/a
exonexon:Solyc09g089870.2.1.5SL2.50ch09:69491171..69491433263-n/a
exonexon:Solyc09g089870.2.1.6SL2.50ch09:69490850..69491053204-n/a
intronintron:Solyc09g089870.2.1.2SL2.50ch09:69493276..69495394n/a-n/a
intronintron:Solyc09g089870.2.1.3SL2.50ch09:69492286..69493197n/a-n/a
intronintron:Solyc09g089870.2.1.4SL2.50ch09:69491764..69492207n/a-n/a
intronintron:Solyc09g089870.2.1.5SL2.50ch09:69491434..69491600n/a-n/a
intronintron:Solyc09g089870.2.1.6SL2.50ch09:69491054..69491170n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17938353%2Fdetails feature 17938353
User comments 
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