Solanum lycopersicum mRNA Solyc09g097870.2.1

mRNA details  
Name
Solyc09g097870.2.1
Type
mRNA
Length
1,484
Organism
Solanum lycopersicum
Description
Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch09:71862049..71864380
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2332
Nb exon
8
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g097870.2.1 Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

TCCCACTTTCCTCATTTTCTCTTCCAATTCTCCTCTCTACATGTTTTCTTTCCTTTCAAACAACAAAGTCATTTTCTTCTAATATTTTGTTACTACTCCAAAAGATATTGTGTCCATTTTTTTTCCAAGAAAATTCCTACCCTTTTTTCTTCTTGAATTTTTAGCCTTTTGGGGTTCTTTTTTTCAAAATGGAAAAGGGAAATTTGTTCATAAATGATGATAACACTACCTATGAACATCTTCAAAATTGTTTCTTTAATCCCAATTTAGATAACAACAATTCTGATCCATTTGAATCAGCATTGAGTTCAATGGTATCTTCTCCTATTTCAATTCCTAATAATAATAGTGGTAGTGATAATTTTGTATTAAGGGAATTAATTGGTAGACTAGGAAGTATTTGTAACAATACTAATAATAATAGTAGTAGTACTAATAATTCTTGTTATAGTACCCCTTTAAATTCTCCACCAAAATTGAATCTTTCTATGAGAGGTAATTTACCACCAACACAATTTACTACTGATCCTGGATTTGCAGAAAGAGCTGCTAGATTTTCTTGTTTTGCTACAAATTTAGAAAGTAATCATTCCATCAAGATTCAAGATGTCAATTTGGTTCAAAGAAATTCTGAATTTGGAGATTCAAGAGAAAATTCATCACTTTCTGAGCAAATGATTGGTCAAAATGATACAAATTCAAGAAAAAGAAAATCAATTTCCAAGGGAAAATCATCCAAGATTGTCAATGATAAAAATGAATCAAATGCCAAAAGAAGCAAGTCTGAGGAAAATGAAAATAAAGTAACAAAAAAAGAGGAAAATGCTGTTTTAGAAGAAAATAAAGATAACCAAAAGGCAACAGAACCACCAAAGGACTATATTCATGTGAGAGCTAGAAGGGGACAGGCCACAGATGCACATAGTCTAGCTGAAAGAGTGAGAAGGGAGAAAATTAGTGAAAGAATGAAGCTTTTACAAGATCTTGTACCAGGCTGCAATAAGGTGACTGGAAAAGCTGTAATGCTTGATGAGATTATTAACTATGTACAATCACTTCAACGTCAAGTTGAGTTCCTTTCAATGAAATTAGCTACTGTGAATCCAAGAATGGACTTTAATATGGAAGCACTTCTTTCCAAGGATATGTTTCAATCTAGGGGATCATTGGGACATAACATGTATCAATCAGAAACATCAACCCAAGCATTTCCTTATGGATTTCAATCTCAACCAAACCAAAATTATCATAAAGGAACAGAGTTTCCTTTCCAAATTAACTCATTGAATCCTAATTTGATCAGAAATTCAAGTATGCAATTGCCTCCTCTAGATGGTTTTGTTGAGCCTACCCCTCAGGTCCCCACATTCTTTGAGGATGATCTCAATAGTGTTGTTCAAATGGGATTTGGACAAAATCAGAACCAAAGTTTTCCGGGTGTAGCAGGCAATGTACCTAATTCTCAAATGAAAGTTGAACTATGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g097870.2.1SL2.50ch09:71862048..71864192432-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g097870.2SL2.50ch09:71862049..718643802,332-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g097870.2.1.1SL2.50ch09:71863632..71864380749-n/a
exonexon:Solyc09g097870.2.1.2SL2.50ch09:71863317..71863505189-n/a
exonexon:Solyc09g097870.2.1.3SL2.50ch09:71863145..7186321066-n/a
exonexon:Solyc09g097870.2.1.4SL2.50ch09:71862972..7186304069-n/a
exonexon:Solyc09g097870.2.1.5SL2.50ch09:71862790..7186286172-n/a
exonexon:Solyc09g097870.2.1.6SL2.50ch09:71862472..71862684213-n/a
exonexon:Solyc09g097870.2.1.7SL2.50ch09:71862243..7186233088-n/a
exonexon:Solyc09g097870.2.1.8SL2.50ch09:71862049..7186208638-2
intronintron:Solyc09g097870.2.1.2SL2.50ch09:71863506..71863631n/a-n/a
intronintron:Solyc09g097870.2.1.3SL2.50ch09:71863211..71863316n/a-n/a
intronintron:Solyc09g097870.2.1.4SL2.50ch09:71863041..71863144n/a-n/a
intronintron:Solyc09g097870.2.1.5SL2.50ch09:71862862..71862971n/a-n/a
intronintron:Solyc09g097870.2.1.6SL2.50ch09:71862685..71862789n/a-n/a
intronintron:Solyc09g097870.2.1.7SL2.50ch09:71862331..71862471n/a-n/a
intronintron:Solyc09g097870.2.1.8SL2.50ch09:71862087..71862242n/a-n/a
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Related viewsNone found
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