Sol Genomics Network

Solanum lycopersicum gene Solyc09g097980.2

Name Solyc09g097980.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc09g097980	Length 3,351

Description

Aldo/keto reductase family protein (AHRD V1 ***- D7KWQ9_ARALY); contains Interpro domain(s) IPR001395 Aldo/keto reductase

Location(s)

SL2.50ch09:71924051..71927401

GFF source

ITAG_eugene

From BOGAS: 1

Length: 3351

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc09g097980.2.1	SL2.50ch09:71924051..71927401	1,306	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc09g097980.2 SL2.50ch09:71924051..71927401
GCGCATAATTCTAAACCACAGTCCTTCACATTTAGCAGAGTGAAATAGGCTGAAAGGACAACAATGGCGACGGAAGGAACAAAAGTGGGAAGAATGAAGTTGGGTTCAGAGGGGCTTCAAGTATCTGTTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCGCCCAAACCCGAACCCGAAATGATCGAACTAATCCACCACGCCATTAACTCCGGCGTCACTCTTCTTGATAGCTCCGATGTATATGGGCCATACACCAACGAAATCCTCATTGGTAAAGTATGATGTTCAACCTTTTTTACCCCAAATGCTTAATTTTTTTTTGTTTATGCATTAGGATGGTTGTACGTAATTCTATGATTGTTGTACCTTTATTGGTTTTGGTAAAAGTATGTGATTGCTACTCGTCGTCCCAAGATGAGAACTTTACAGTTAAATTGTTACTAATAAATAAAGCTATACTATCTGTTTCAATTTGTTTGTCTTACTTTTCTTGTTAATCCGTTTTTAAAATTGCTTATATGTTTAGATCACGCAATTGAAGAACATTTTGATACATTCTACGTATCTTTAGTTTAACATCATAAGATTCAAAAGTTTTTCATTATTCTCTTAAATTTTGTGTAAGTGAAAACCAGGCAGACAAATTGAAATGGAGTATCATTTTTGGAACGGACTAAAAAAAGGAGTGTTACATCACAGGACGGAGGGAGTAAGTACTAAGTAGTAGTGCTAATTACTGGTGTTTGAGAAGGAACACTTTTTTATTTGTTTACATATGCAGAATATGATTGTTCTCAGAGTTTAAAGTCTTGCACTTTTCTTTTTTTGGGTTGGCGGCGGGGTTGTTATGAAACTTTGAGGTACTATTACATGTTTTCACCTGACAATGTGCTACCTTTCAGACTTTCAGATGCTTAAGCCTCGCGAGTTACACCTTAAGAAGAAGAATTTTCATGATTCTTCAAACCTGTATCATCATGCGCGATTTCTAATTTTACTATTTGAGCTTACCTTGTTTTTTTCCTGCAAAGTCGTTTTTTTCTTAATATAAAGTACACTGAAACAAAAGTGTAGTGAACTTGTATTTTCTTATAGAAGTGTTCAAGTTAACTTATGTGCACCTTGATTATTTCATCATGTAGTTGCTACCTTCCATTAGCACAAATATTGAGTAACTTTACAGACCTAGGCTGAGATAAATGAAATGAAATCATTTTGTATTTTATTTTTAATTTTTGTCTCCGCTGAGATTTGAATCGAACTTTATAAAGTTCGCATCGACTTCATCAACCATAAACCACACTCTTAAGCTTATTCATTCATCGCATAAGCAACTGAGAATTTTTAACCATTTTGCAATAATTGTTGCTTGCAATTCTGATTATTATGTATCTATGTAGGCTTTGAAGGGAGGGATGAGAGAACGGGTTGAATTAGCAACAAAGTTTGGTATTGTTTTAGGAGATGAAAAGAAAGCAGAAGGAAAGAGAGAAGTGCATGGAAATCCAGCCTATGTAAGGTCAGCGTGCGAGGCTAGTTTAAAGCGACTTGATGTTGACTGTATAGACTTGTACTATCAGCACCGAATTGATACACGTGTGCCCATTGAAGTCACGGTTAGTTCTTTTTTTTCCATTTATGACTCTTTGAAGGTACTTATTATGTATTTTGGAAAATGATGTAATATTTGATCTTACTCGGAGGATGACTACTGAGGAAATAGTGTTGCTAAAATCTAATAAAATAATTACTGTATAGTGGTTATATTGTATCTACAAATGCTCTTGACTGTAATGCAAGCTTCTGGCTAGTATTCGAGTATATGTTTTTACTTATTATCTCAATGCAATATTTCGGAATTGATCTAGCACTTGTTAGCCACACTCTTTATATTGCTTAGACCAAAATCATTGCCCTTATAGTCCAAATCAGCAAGACAATTCCCTGTCTTTCTGCTTTATTGAAAAAGAAAGCAACAATAAAAGAAATGATCATCCAGAGACTGGAATCAAACAATATGAAGATGAACGGAAAAATAGATTAACTGCTCTCTTTTTCAGATTATTGTCAACATTTCTTATTCCCTTGAGATTCCTGTTTTACCAGGTTGGAGAACTTAAGAAGCTGGTCGAAGAAGGTAAAATAAAATATATAGGTCTATCCGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCTCTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAGGTCTATTCTTCTTTCTGTTAGTTTTCGTGTTTGGGGTATACAGCAGTGTGAGATCCTGATGTTCTCCTATCTGTTAATCGTTCAGAGAACTCGGAATTGGGATTGTGGCATACAGTCCACTAGGACGGGGCTTTTTGTCTTCCGGTCCAAAGCTGCTTGAGGATTTGTCAAATGAAGACTACCGAAAGGTTTGCTTTGTTGTTCCGGATTTCAAACATATTGCTATCATGTTTAATTGCATTGATGTATTTCTGTTGCGAGTATATTTGCTTGTTTTATAGAAGAAAGAGTTTCGAATAATAAGCTATTTGATCTGGATGGTATTACTAGGGACAAAAGCTTTCAATCAAAAGTCATGAAGTATGAACTTAACATTGTCCCTTATATATTGCCATTTGTTTAATTGGTATACAATGCTCTCCTTTGTGCTGTTTAGTGTTACTATTTGTTTTCCTCTACTTGCTACGCGATATTGTGGGAGAGTAAAGTACGTCTTCAATTGGTTGGACTTAAAATTGATCCTCAATTTTGCAGCATCTGCCAAGGTTCCAGGCGGAGAATCTTGAGCATAACAAAAAGCTGTATGAGCGAATTTGTCAAATGGCAGCTAAGAAGGGATGCACTCCTTCTCAACTAGCGTTGGCTTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCTGGCACCACTAAGATTGAAAACTTCAACCAGAACATTGGAGCTCTGTCTGTAAAGTTAACATCAGAAGACATGGCAGAACTTGAATCCATTGCCTCAGCTAACGCAGTCCAGGGTGATCGATATATACCTGGTATGAGTACTTTCAAAAATTCAGAAACGCCGCCCCTTTCAGCATGGAAGGCTACATGATGTTGCAGTTGCTTGAGTTGTTGTTCTTGTGTTGTGCATAATATGCACTGAGAGAGTATATTTCTCTGTTTCAAAATTCAAACTATAGTGCCATTTAATTATGGTTCAAATAATAAAGTTCATGTTTATGTTTGTAGACTTTTACCTATGGAGTAAAATACTGACAATTTCTACCCCATTGCCTTAC

Download sequence region

Download sequence (3.3Kb)

Get flanking sequences on SL2.50ch09

mRNA Solyc09g097980.2.1

Ontology terms

terms associated with this mRNA

GO:0055114 – obsolete oxidation-reduction process (obsolete GO:0055114)

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc09g097980.2.1	SL2.50ch09:71924113..71927214	352	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc09g097980.2	SL2.50ch09:71924051..71927401	3,351	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc09g097980.2.1.1	SL2.50ch09:71924051..71924338	288	+	n/a
exon	exon:Solyc09g097980.2.1.2	SL2.50ch09:71925463..71925678	216	+	n/a
exon	exon:Solyc09g097980.2.1.3	SL2.50ch09:71926169..71926341	173	+	n/a
exon	exon:Solyc09g097980.2.1.4	SL2.50ch09:71926427..71926529	103	+	n/a
exon	exon:Solyc09g097980.2.1.5	SL2.50ch09:71926876..71927401	526	+	1
intron	intron:Solyc09g097980.2.1.1	SL2.50ch09:71924339..71925462	n/a	+	n/a
intron	intron:Solyc09g097980.2.1.2	SL2.50ch09:71925679..71926168	n/a	+	n/a
intron	intron:Solyc09g097980.2.1.3	SL2.50ch09:71926342..71926426	n/a	+	n/a
intron	intron:Solyc09g097980.2.1.4	SL2.50ch09:71926530..71926875	n/a	+	n/a

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Related views

Genetic loci

Tomato locus Solyc09g097980

http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17941965%2Fdetails feature 17941965

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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