Solanum lycopersicum mRNA Solyc09g098110.2.1

mRNA details  
Name
Solyc09g098110.2.1
Type
mRNA
Length
1,403
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** B6SY24_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH
Location(s)
SL2.50ch09:72004219..72012046
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
7828
Nb exon
6
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g098110.2.1 BHLH transcription factor (AHRD V1 *-** B6SY24_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH

AACTTGCTCTCTTCCCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTGTTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAGTTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGGGAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAGCAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAGAATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACATTTACA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g098110.2.1SL2.50ch09:72004452..72011951358-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g098110.2SL2.50ch09:72004219..720120467,828-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g098110.2.1.1SL2.50ch09:72011522..72012046525-2
exonexon:Solyc09g098110.2.1.2SL2.50ch09:72006240..72006553314-n/a
exonexon:Solyc09g098110.2.1.3SL2.50ch09:72005450..72005587138-n/a
exonexon:Solyc09g098110.2.1.4SL2.50ch09:72005039..7200510466-n/a
exonexon:Solyc09g098110.2.1.5SL2.50ch09:72004840..7200490869-n/a
exonexon:Solyc09g098110.2.1.6SL2.50ch09:72004219..72004509291-n/a
intronintron:Solyc09g098110.2.1.2SL2.50ch09:72006554..72011521n/a-n/a
intronintron:Solyc09g098110.2.1.3SL2.50ch09:72005588..72006239n/a-n/a
intronintron:Solyc09g098110.2.1.4SL2.50ch09:72005105..72005449n/a-n/a
intronintron:Solyc09g098110.2.1.5SL2.50ch09:72004909..72005038n/a-n/a
intronintron:Solyc09g098110.2.1.6SL2.50ch09:72004510..72004839n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17942123%2Fdetails feature 17942123
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