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Solanum lycopersicum mRNA Solyc10g005000.2.1

mRNA details  
Name
Solyc10g005000.2.1
Type
mRNA
Length
1,480
Organism
Solanum lycopersicum
Description
Os03g0648300 protein (Fragment) (AHRD V1 *--- Q0DPZ6_ORYSJ); contains Interpro domain(s) IPR000048 IQ calmodulin-binding region
Location(s)
SL2.50ch10:4134..5923
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
1790
Nb exon
5
Sifter term
GO:0005516
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g005000.2.1 Os03g0648300 protein (Fragment) (AHRD V1 *--- Q0DPZ6_ORYSJ); contains Interpro domain(s) IPR000048 IQ calmodulin-binding region

TTGTGTTCAAAGGTGCTGGCTGACACCACCCACTCACCCATTCACACTAAAAATGTCTCTCTCAGTTTGAGTACATTAATTCTATGGGAAATAACAAAAAAGGATCATCTTCTTCTTGGTTAAGTGCTGTTAAGAGAGCTTTTAGATCGAAGAAGCAAATTAATGAGGAAGAAAAGAAGAAGGAAAATCAAAGGAAGCAGCAGCATACTACTAATCATAATGCTGCAGCTCAGGCTGCCACTATTATTCAAACAGCTTTCAGGGGATATTTGGCAAGAAGGGCTCTAAAAGCACTAAAAGGTCTAGTGAAATTGCAAGCTTTAGTGAGAGGTCACAATGTTAGGAAACAAGCCAAGATGACTCTCAAATGCATGCAAGCTCTTGTTAGAGTTCAAGCACGGGTATTGGACCAGCGATTTAGGCAATCGGAGCAAGCAAGTAGAAAATCAGACACCACTACCTCCCACCAACATATGTCAAGCACTATTCCTGATGATTGGGATGAAAGGCCTCATACTATCGAAGAGGTAAAAGCAATGCTGCAAAAGAGAAAAGAAGCTGCTTTCATGAAGTGCCAAGGGACCCCCTTTTCTCAACAGACAAGGAGAAGTGGCAGAAGTTCCTCGATAGGAAGTGATGCGGATTTTGGAGAAAAAAGGGCGGCTGCAAAATCATGGGACAGTAGTAGTAGAGGCAGAGCATCAACTTATCCTGTCGAAATGGATACATCACAACGTAATTTAATAACAAGATTACACCAACGACCAACTTCACCCCTTCATACATCTTTTCAATTCCCCGTTACACCTTCTCCATCCAAATCAACAAGACCTATTCAAGTACGCTCTGCTAGTCCAAGACATGACAAAAAATCTCAAACTCCAAGCCTGAGGCCTAATAATAACTACTCCTCATACCAACCTAATAGACTAACTTCTAGTGCTGCAGCAATTCCTAACTACATGGCTGCTACCGAGTCTGCTTTGGCAAGAATTCGTTCACAAAGTGCCCCACGACAGAGACCATCGACTCCAGAGAGGGATCGAGCTGGATCAGCTAAGAAACGACTTTCTTTCCCTGTCCCTGACCGTTATGGGAATGTCCCATCAGCCTATGGACACAATCTTAGGAGTCCAAGCTTTAAGAGCCTTAGTGGAGTACATTTCGGATATGAACAACAGTCTAACTATTCTTCGTGTTACACGGAGAGTATTGGTGGTGAGATCTCTCCATCCTCAACTAGCGATTTCCGAAGGTATTTAAGATGACCAAACGGAAAAAATAAGGTGATCAATAATGTACATGCTAATGCATATTGTAACTGTACTGCCTTTTTCTTGTTTGTTTGTTTGGAGTGTTATTTTTTACATTCCTTGCTCCCTTGAGATTTCCTCCTAACTTGTAATGTATTTGAACCCATTGATGTGTTGGTCAAACCTATTGTAACTAGTTCTGCAAGCATTATTTAGTGAAACAACAC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g005000.2.1SL2.50ch10:4345..5840395-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g005000.2SL2.50ch10:4134..59231,790-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g005000.2.1.1SL2.50ch10:5748..5923176-n/a
exonexon:Solyc10g005000.2.1.2SL2.50ch10:5574..566996-n/a
exonexon:Solyc10g005000.2.1.3SL2.50ch10:5300..5503204-n/a
exonexon:Solyc10g005000.2.1.4SL2.50ch10:5099..5221123-n/a
exonexon:Solyc10g005000.2.1.5SL2.50ch10:4134..5014881-n/a
intronintron:Solyc10g005000.2.1.2SL2.50ch10:5670..5747n/a-n/a
intronintron:Solyc10g005000.2.1.3SL2.50ch10:5504..5573n/a-n/a
intronintron:Solyc10g005000.2.1.4SL2.50ch10:5222..5299n/a-n/a
intronintron:Solyc10g005000.2.1.5SL2.50ch10:5015..5098n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17942891%2Fdetails feature 17942891
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