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Solanum lycopersicum mRNA Solyc10g006510.2.1

mRNA details  
Name
Solyc10g006510.2.1
Type
mRNA
Length
1,076
Organism
Solanum lycopersicum
Description
Transcription factor (Fragment) (AHRD V1 **** D6MKL1_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch10:1086687..1090586
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3900
Nb exon
5
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g006510.2.1 Transcription factor (Fragment) (AHRD V1 **** D6MKL1_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

AATTGTCTCAAAATTCCAAATTCCAATCTCTAATCTTTGGTTATTGAAAACCCGTTTGTTTAAATTCTTTCCCTTTTCATTTTTCCATTTCCAACTTTTTTTTCCGGTCACCGGAAATATTTTCTTGAAATTCCGACGGTTGATCGGAGATGGTTCTACCGGAAAACACCAACTGGTTGTATGACTATCATTATGAAGATATAGTCACCCCTGATGTTAATTTCTCAGTTTCTGGTTATTCTTGGTCTATGCAGGGGTTTAATGGTTCAACTAATGCTAGTGTTGATATTGATGGCTCACTTGGTGAATCAGACTGCGTGAAGGAAAGCGGTTGTAAGAAAAGGACAAGAGCTGAATCATGCACCTCATCAAGTTCCAAAGCTTGCAGGGAGAAATTAAGGAGAGAGAAACTGAATGAAAAGTTCATGGAATTGGCGGTGCTTCTTGAGCCCAGCAGGCCTCCAAAAACAGACAAGAGTGCCATTCTTGTTGATGCTGTTCGCGTGGTGACACAGTTACGTGGTGAGGCTCAAAAATTGAAAGACTCAAATTTGGATCTACAAGAAAAGATAAAGGAGTTGAAGGTTGAGAAAAATGAGCTTCGAGATGAAAAGCAGAGGCTGAAGTCCGAGAAAGAGAAGCTAGAGCAACAACTAAAGACTATGAGTGCACAACCTAGCTTCCTGCCTCCTGCCATGCCTGGTGCTTTTGCTTCTCCAGTTCAAGCTGCAGGAACCAAGCTGGTGCCAATCATAAGTTACCCTGGAGTTGCCATGTGGCAATTCATGCCTCCTGCTGCAATAGATACCTCGCAGGATCACGTGCTCCGCCCTCCAGTTGCTTAAATTTGCTGCTAAAACCTATGATAATTGACTTAACTCCGATATGTTGTTCTAGTTAAACGCTCTTTAGCTGTGTTAGTTTATTCGTCGAGTCCTTTTGGTGTATTTGGTGGATAATAGTAGTTCTCTTGTAATCTTTGCACTTTTAATGTGTTAAATGCTGGTTTTATCAACTGTAAATTTTAGCAGGTTCAACCTGGCATTTACATATTCATTCTTTTCTGTCCTGATTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g006510.2.1SL2.50ch10:1086917..1090437232-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g006510.2SL2.50ch10:1086687..10905863,900-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g006510.2.1.1SL2.50ch10:1090307..1090586280-1
exonexon:Solyc10g006510.2.1.2SL2.50ch10:1088233..108829563-1
exonexon:Solyc10g006510.2.1.3SL2.50ch10:1087567..108764478-1
exonexon:Solyc10g006510.2.1.4SL2.50ch10:1087322..1087484163-n/a
exonexon:Solyc10g006510.2.1.5SL2.50ch10:1086687..1087178492-n/a
intronintron:Solyc10g006510.2.1.2SL2.50ch10:1088296..1090306n/a-n/a
intronintron:Solyc10g006510.2.1.3SL2.50ch10:1087645..1088232n/a-n/a
intronintron:Solyc10g006510.2.1.4SL2.50ch10:1087485..1087566n/a-n/a
intronintron:Solyc10g006510.2.1.5SL2.50ch10:1087179..1087321n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17944849%2Fdetails feature 17944849
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