Solanum lycopersicum mRNA Solyc10g006640.2.1

mRNA details  
Name
Solyc10g006640.2.1
Type
mRNA
Length
1,260
Organism
Solanum lycopersicum
Description
BHLH transcription factor-like protein (AHRD V1 *-*- Q5ZAK6_ORYSJ); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch10:1145988..1149662
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3675
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g006640.2.1 BHLH transcription factor-like protein (AHRD V1 *-*- Q5ZAK6_ORYSJ); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

CTCTTCTTTCCTACACTTCTTTTTATCATTTCTCGAAAATCGCGAAGATAATTTTTCGATAGAAAAGCTGCTATCTGTATTGAAAACGTTGTTTTTGCTATGGCGGAAGAATTTCAACTAGGGGGAGGGAATTGGTGGGAAAATAATACGTCCACATCATCAAGGAATAGGTTCGATAGTAGTGGTTCATCCATTACACCTACAACTTCCACATCGGCCACTACTACTGACTATAGTAGTAATTGGCCGATACAAACTAATCATGTGGACATCAAACCTAGGACTTTCTTGGATTCTGTGTCGGTGTCTCAATCTTCCGATCATGATGATAAGGGTGAAGGAGGAGGAGGAGGTGGCGGCGGCGTTTTATCTTCTCATGATTCAAATTTTCAAATTATGGGTTTGGGCCTTACTTCTCAACCACATGATTGGAACCATCAATCTTTATTGAATTATGAGGATTCTTCGTCACAAATGAATATTAGGGGTTTTTCATTAGATCAAAATAATTCAATATTTAGTCATTCATCAAATTACGAAGTAACTGATAATCATCAAGTGTTGCATTCGTCTACGACGAATTCTTGGTCTAAATTTCCTCAATTTCTCCGAGCATCACCTTCGCCGGAGCAGCCTCCATTGCCGCCACCGGCGCGGCCGTTGCCGCCACCTCACAGCCAGCTGCATTTCTCAAATAATACTCCATTTTGGAATGCAAGTGCAGCTTCCATGAATGATGTTCCTTCAAGTTTATTTCCTTCTAATTTGCATAATATTCCTAATAACACAACAATTGATGAGAAAGCAAAGAATATGGGAGATGTTAGAGATATAAATAGAATTATATCAAAGAAAACCACCACTATTGAAACATCAAATAAAAGACCAAGGAATGAAACTTCAACTCCTTCTCCGATAATTAAGGTGAGAAAAGAGAAAATGGGAGACAGAATCACTGCACTTCAACAATTAGTCTCACCTTTTGGAAAGACAGATACAGCTTCTGTATTATCAGAAGCAATTGAGTATATAAAGTTCCTCCATGATCAAATTGGTGCATTAAGCGCCCCATATATGAAAAGTGGAGCATCCATGCAACATCTTCAGAGTGATAATAAATCCGAAGATATCGGAGAAGGAAGAAATAAAGATTTGAGAAGTCGAGGGTTATGTTTGGTACCAATTTCAAGTACTTTTCCAGTAACTCATGAGACTAATGTTGATTTATGGACACCTACTTTTGGATCAACTTTTAGATAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g006640.2.1SL2.50ch10:1145987..1149563387-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g006640.2SL2.50ch10:1145988..11496623,675-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g006640.2.1.1SL2.50ch10:1149214..1149662449-n/a
exonexon:Solyc10g006640.2.1.2SL2.50ch10:1148715..1149075361-1
exonexon:Solyc10g006640.2.1.3SL2.50ch10:1147937..1148050114-n/a
exonexon:Solyc10g006640.2.1.4SL2.50ch10:1147693..114775866-n/a
exonexon:Solyc10g006640.2.1.5SL2.50ch10:1147349..114741466-n/a
exonexon:Solyc10g006640.2.1.6SL2.50ch10:1146363..114641351-n/a
exonexon:Solyc10g006640.2.1.7SL2.50ch10:1145988..1146140153-n/a
intronintron:Solyc10g006640.2.1.2SL2.50ch10:1149076..1149213n/a-n/a
intronintron:Solyc10g006640.2.1.3SL2.50ch10:1148051..1148714n/a-n/a
intronintron:Solyc10g006640.2.1.4SL2.50ch10:1147759..1147936n/a-n/a
intronintron:Solyc10g006640.2.1.5SL2.50ch10:1147415..1147692n/a-n/a
intronintron:Solyc10g006640.2.1.6SL2.50ch10:1146414..1147348n/a-n/a
intronintron:Solyc10g006640.2.1.7SL2.50ch10:1146141..1146362n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17944954%2Fdetails feature 17944954
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)