Solanum lycopersicum mRNA Solyc10g007600.2.1

mRNA details  
Name
Solyc10g007600.2.1
Type
mRNA
Length
1,574
Organism
Solanum lycopersicum
Description
L-lactate dehydrogenase (AHRD V1 ***- LLDD_VIBPA); contains Interpro domain(s) IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent
Location(s)
SL2.50ch10:1896939..1901455
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008152
  • GO:0016491
  • GO:0055114
Length
4517
Nb exon
12
Sifter term
GO:0008891
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g007600.2.1 L-lactate dehydrogenase (AHRD V1 ***- LLDD_VIBPA); contains Interpro domain(s) IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent

ATGCTGGTTCTTTCCTCTTATCTTATAATAATATAATAAAACATTATATTCCCTCAATTATTGTTTCACTCTTCATTGCTTGGGAGTACTCAAAAGTTTTTAAATATCGTAAAACAAGTACAACATGGGGGAAGTTACCAATGTGATGGAGTTTGAAGCAATTGCAAAGCAAAAGTTGCCAAAAATGGTGTATGACTACTATGCATCTGGAGCAGAGGATCAATGGACTTTGGCTGAGAACAGAAATGCCTTTTCAAGAATTTTGTTTAGGCCTCGTATTCTTATTGATGTAAGCAAGATTGACTTAAGCACAAGCGTGCTCGGTTTCAATATCTCAATGCCTATCATGATTGCACCAACAGCTATGCAGAAAATGGCTCATCCTGATGGTGAGTATGCTATAGCAAGAGCAGCATCGGCAGCAGAAACAATTATGACACTGTCGTCTTGGGGAACTTCAAGTGTCGAGGAGGTTAATTCAACAGGACCTGGCACCCGTTTTTTCCAGCTCTATGTCTATAAGGACAGAAATGTAACAATTCAGTTGGTGCGAAGAGCTGAAAGAGCAGGTTTTAAGGCTATAGCTCTTACAGTTGATACCCCGAGATTGGGACGTAGAGAAGCTGATATTAAGAACAGATTTAATTTGCCACCACATTTGTCACTGAAGAACTTTGAAGGACTGGACATTGGCAAGCTGAACAAAGCTGAGGACTCTGGATTGGCTTCATATGTCGCTGGTCAAGTTGATCGATCATTGAGTTGGAAGGATGTTCAATGGCTACAGTCAATTACTTCACTGCCAATCCTGGTAAAGGGTGTACTTACAGCTGAAGATGCTAAGATTGCAGTTCAGTCTGGAGCAGCTGGTATCATTGTGTCGAACCACGGTGCTCGACAACTTGACTATGTCCCTGCCACAATTATGGCTCTTGAAGAGGTTGTGAAAGCTGTACAAGGCCGTATCCCCGTGTTCCTGGATGGAGGCGTTCGTCGTGGAACAGATGTCTTTAAAGCGCTGGCGCTTGGTGCATCAGGCGTGTTTATTGGGCGACCAATCATTTGGTCATTGGCTGCTGATGGAGAAGCTGGTGTCAAGAAAGCACTGCAGATGATACGCGATGAGTTTGAGCTAACGATGGCATTGAGTGGCTGTCGTTCACTGAAGGAGATTACGCGTAACCATGTCATGACTGATTGGGAGACTCCACGGGCTTCTCTTCCCGTGCCACGGTTATAAACATCAGAGAAGACAGAAGACCTTTGGTGTTAAATTGTTTCACCAAGGCAAAATGTTCAGTTTCCATTCATGTTCCAAATGCCCCTTGTGATCTAGCCCTTCTCCAGACTCTGCGCGTAGTGAAAGCTTAGTGCATCGAGTTTGCCTTTTGAATAACTTATCTATCTTTCATTGGAACATTTATTTTTGTGTGATGAGTTTGCATTATGTATATTTTTGATAAATGACTAGAGATGCCTCCATTGGGTATTCTCTAATCATTATTTTCTTAATAAGAATGTCTGTTTTTGTGGGATATATTGATTAGAGTTTAAGTAATATATATTGTCGATCG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g007600.2.1SL2.50ch10:1897272..1900788372-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g007600.2SL2.50ch10:1896939..19014554,517-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g007600.2.1.1SL2.50ch10:1901360..190145596-n/a
exonexon:Solyc10g007600.2.1.10SL2.50ch10:1897845..1897945101-n/a
exonexon:Solyc10g007600.2.1.11SL2.50ch10:1897637..1897741105-n/a
exonexon:Solyc10g007600.2.1.12SL2.50ch10:1896939..1897467529-n/a
exonexon:Solyc10g007600.2.1.2SL2.50ch10:1900649..1900816168-1
exonexon:Solyc10g007600.2.1.3SL2.50ch10:1899736..1899860125-2
exonexon:Solyc10g007600.2.1.4SL2.50ch10:1899478..189952447-n/a
exonexon:Solyc10g007600.2.1.5SL2.50ch10:1899252..189932978-n/a
exonexon:Solyc10g007600.2.1.6SL2.50ch10:1899039..1899163125-1
exonexon:Solyc10g007600.2.1.7SL2.50ch10:1898872..189893867-n/a
exonexon:Solyc10g007600.2.1.8SL2.50ch10:1898724..189878663-n/a
exonexon:Solyc10g007600.2.1.9SL2.50ch10:1898303..189837270-2
intronintron:Solyc10g007600.2.1.10SL2.50ch10:1897946..1898302n/a-n/a
intronintron:Solyc10g007600.2.1.11SL2.50ch10:1897742..1897844n/a-n/a
intronintron:Solyc10g007600.2.1.12SL2.50ch10:1897468..1897636n/a-n/a
intronintron:Solyc10g007600.2.1.2SL2.50ch10:1900817..1901359n/a-n/a
intronintron:Solyc10g007600.2.1.3SL2.50ch10:1899861..1900648n/a-n/a
intronintron:Solyc10g007600.2.1.4SL2.50ch10:1899525..1899735n/a-n/a
intronintron:Solyc10g007600.2.1.5SL2.50ch10:1899330..1899477n/a-n/a
intronintron:Solyc10g007600.2.1.6SL2.50ch10:1899164..1899251n/a-n/a
intronintron:Solyc10g007600.2.1.7SL2.50ch10:1898939..1899038n/a-n/a
intronintron:Solyc10g007600.2.1.8SL2.50ch10:1898787..1898871n/a-n/a
intronintron:Solyc10g007600.2.1.9SL2.50ch10:1898373..1898723n/a-n/a
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Related viewsNone found
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