Solanum lycopersicum mRNA Solyc10g009350.2.1
![]() |
Name | Type |
Length
2,167
|
Organism |
Description
Serine/threonine protein kinase (AHRD V1 *-** D0NNA3_PHYIN); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
|
Location(s)
SL2.50ch10:3414014..3418293
|
Ontology term(s) |
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0006468
- Length
- 4280
- Sifter term
- GO:0004672
![]() | spliced mRNA sequence, including UTRs |
>Solyc10g009350.2.1 Serine/threonine protein kinase (AHRD V1 *-** D0NNA3_PHYIN); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
TTAATTCGACGAATTGGGTGGATCTCAATGATACCCAATGTCGATTCCTACGACAATTCTTCTTCCTCCCTGGCCTTTTCAGTCATTCAAAAAAATCATTTTTTCTTGATGAAATCCTCTTTTCTCTTTGAGTAAAAACCTTTTCTTCTTCTTCGTCGTCGTTGTTGTCGTTGTGTTTTGTTTTTGTTCAACAAAAATGATTTCTGGGGCTGGAATTGGAAATTGGGGTAATGAGACATACAATTTGCAAGATGACTATGTTGAGAAAGATCCTAATGGACGATATGTTAGGTATAATGAGGTATTGGGAAAGGGAGCATTCAAAACTGTTTACAAGGCATTTGATGTAGTTGAAGGTATTGAAGTTGCATGGAGTCGCGTAAAAATGGAGGACGTGCAGCCACCAGAAAGTTTGGAAAAATTGTATTCAGAGGTTGATCTTCTAAGACAATTGAAACATGAAAACGTAATGCAGTTATACGATTCGTGGATCGATCACAAGAAGAAGACAGTTAACATGATTACTGAGCTCTTCACGTCTGGGAATCTGAGGCAATACAGTAACAAGTATAAAAGTGTTGATATGAAGGCTATAAAGAATTGGGCAAGACAGATTCTTCAAGGTTTAGAGTATCTCCATAGTCAGAATCCACCTATCATTCATCGAGATTTGAAATGCGATAATATTTTTGTTAATGGAAATCATGGGGAAATCAAGATTGGTGATCTTGGATTGGCAACTATTATGAACCAACCAACTGCTAAGAGTGTTATTGGGACTCCTGAATTCATGGCTCCCGAGCTGTACGAAGAAGAGTATAATGAACTAATAGATATATATTCCTTCGGAATGTGTATGTTGGAAATGATAACTTTTGAGTACCCTTACAGCGAGTGCAAGAACTCTGCTCAAATTTATAAGAAAGTTAGCTCGGGCGTTAAACCTGCTTCCCTCAGTAAAGTTATCGATCCTCAAGTCAAAGCATTCATTGGAAAATGTTTGGTTGCAGCATCTGAGAGATTGTCAGCCAGGGACCTCCTGAAAGATTCGTTTCTTCAAGTCGAAAACTTGAAGGACTCAGTCGATAATCAAACTCAGTTACCCAAGCAAAGTCCTGGATCGTTGAGTTTATCGAAGCCATTAACTCATCCGATGGATATGGATTTCGAGTCTAACCAATCTACATATACAGATTCTAGTTACGGAAGCCCTAGCATTCCAGGTTTGGAATTCCAAAGATGTCATCAGAATAACGAATTCAAATTAATGGGGAAGAAGAATGACGACAACTCAATTTCATTGACTTTGCGGATCAGAGATCCTGCTGGTAGTGTAAGAAATATACATTTCATTTTCTATCTTGAAACTGACACTGCACCATTAGTTGCTGCTGAGATGGTTGAACACTTGCAGCTATCTGATCATGATGTAGCTTTTATCGCTGACTTTATTGATCACCTAATAATGAAGATATTTCCAGCTTGGAATCCGTCTTCTGGTGACCACCATTCGAGTGGAGGGAGAAATCCAAGCAAACAACCTCATGAAAACTTGAACTTGTCTTCAAATTCGTGGCAAACAGACGTGAGTGGTTGCCCGTACAAGTCCATAGGTCAACAAGGTGTTATTTCTGACTTTAACGTGGTTGGTGCTCAAAGTGATGTGAATTCAGATGACGCTTCTCATCATGTTACATTTGCTTCCCCATCGCGCTATGGAAAATCTCAACAATCAGTAGTTTCGAGAGTAATGGCTGAAGATGCTACTGTATGGTCTGATGATCATATTAATGATGGATTTCCTAGAAGTTGTAGTACAAACATCTCGGAGATGGATTTTAGGTACTTGTTTCACGATGAATGGACAACACAGGAAAACAACAGTGATGTTGCAGAACGCGTGCCATCAAATGAATATGGAAAGGATTCAGAAATAATGACTTATTCAGATATCGACAAAATTTCAAGAGGTATGAGTTTGTCAAGTGGTTCTTTCTCTACTATGGTCGAGAAAGATGAGGATACTGAGCTAAAATTGGAGATGAAAGCGATTGATTTGCAATATCAGCAGTGGTTTCAAGAACTCTCGACAATGAAGGAAGAGGAACTGGAAAACTGCAGGAAGAGATGGAAGACTAAGAAAGTTGTTGTGTACATTGTTGTATAG
TTAATTCGACGAATTGGGTGGATCTCAATGATACCCAATGTCGATTCCTACGACAATTCTTCTTCCTCCCTGGCCTTTTCAGTCATTCAAAAAAATCATTTTTTCTTGATGAAATCCTCTTTTCTCTTTGAGTAAAAACCTTTTCTTCTTCTTCGTCGTCGTTGTTGTCGTTGTGTTTTGTTTTTGTTCAACAAAAATGATTTCTGGGGCTGGAATTGGAAATTGGGGTAATGAGACATACAATTTGCAAGATGACTATGTTGAGAAAGATCCTAATGGACGATATGTTAGGTATAATGAGGTATTGGGAAAGGGAGCATTCAAAACTGTTTACAAGGCATTTGATGTAGTTGAAGGTATTGAAGTTGCATGGAGTCGCGTAAAAATGGAGGACGTGCAGCCACCAGAAAGTTTGGAAAAATTGTATTCAGAGGTTGATCTTCTAAGACAATTGAAACATGAAAACGTAATGCAGTTATACGATTCGTGGATCGATCACAAGAAGAAGACAGTTAACATGATTACTGAGCTCTTCACGTCTGGGAATCTGAGGCAATACAGTAACAAGTATAAAAGTGTTGATATGAAGGCTATAAAGAATTGGGCAAGACAGATTCTTCAAGGTTTAGAGTATCTCCATAGTCAGAATCCACCTATCATTCATCGAGATTTGAAATGCGATAATATTTTTGTTAATGGAAATCATGGGGAAATCAAGATTGGTGATCTTGGATTGGCAACTATTATGAACCAACCAACTGCTAAGAGTGTTATTGGGACTCCTGAATTCATGGCTCCCGAGCTGTACGAAGAAGAGTATAATGAACTAATAGATATATATTCCTTCGGAATGTGTATGTTGGAAATGATAACTTTTGAGTACCCTTACAGCGAGTGCAAGAACTCTGCTCAAATTTATAAGAAAGTTAGCTCGGGCGTTAAACCTGCTTCCCTCAGTAAAGTTATCGATCCTCAAGTCAAAGCATTCATTGGAAAATGTTTGGTTGCAGCATCTGAGAGATTGTCAGCCAGGGACCTCCTGAAAGATTCGTTTCTTCAAGTCGAAAACTTGAAGGACTCAGTCGATAATCAAACTCAGTTACCCAAGCAAAGTCCTGGATCGTTGAGTTTATCGAAGCCATTAACTCATCCGATGGATATGGATTTCGAGTCTAACCAATCTACATATACAGATTCTAGTTACGGAAGCCCTAGCATTCCAGGTTTGGAATTCCAAAGATGTCATCAGAATAACGAATTCAAATTAATGGGGAAGAAGAATGACGACAACTCAATTTCATTGACTTTGCGGATCAGAGATCCTGCTGGTAGTGTAAGAAATATACATTTCATTTTCTATCTTGAAACTGACACTGCACCATTAGTTGCTGCTGAGATGGTTGAACACTTGCAGCTATCTGATCATGATGTAGCTTTTATCGCTGACTTTATTGATCACCTAATAATGAAGATATTTCCAGCTTGGAATCCGTCTTCTGGTGACCACCATTCGAGTGGAGGGAGAAATCCAAGCAAACAACCTCATGAAAACTTGAACTTGTCTTCAAATTCGTGGCAAACAGACGTGAGTGGTTGCCCGTACAAGTCCATAGGTCAACAAGGTGTTATTTCTGACTTTAACGTGGTTGGTGCTCAAAGTGATGTGAATTCAGATGACGCTTCTCATCATGTTACATTTGCTTCCCCATCGCGCTATGGAAAATCTCAACAATCAGTAGTTTCGAGAGTAATGGCTGAAGATGCTACTGTATGGTCTGATGATCATATTAATGATGGATTTCCTAGAAGTTGTAGTACAAACATCTCGGAGATGGATTTTAGGTACTTGTTTCACGATGAATGGACAACACAGGAAAACAACAGTGATGTTGCAGAACGCGTGCCATCAAATGAATATGGAAAGGATTCAGAAATAATGACTTATTCAGATATCGACAAAATTTCAAGAGGTATGAGTTTGTCAAGTGGTTCTTTCTCTACTATGGTCGAGAAAGATGAGGATACTGAGCTAAAATTGGAGATGAAAGCGATTGATTTGCAATATCAGCAGTGGTTTCAAGAACTCTCGACAATGAAGGAAGAGGAACTGGAAAACTGCAGGAAGAGATGGAAGACTAAGAAAGTTGTTGTGTACATTGTTGTATAG
![]() |
unprocessed genomic sequence underlying each location of this mRNA |
![]() |
Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc10g009350.2.1 | SL2.50ch10:3414013..3418097 | 657 | - | n/a |
Add items to a list:
Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc10g009350.2 | SL2.50ch10:3414014..3418293 | 4,280 | - | n/a |
Add items to a list:
Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc10g009350.2.1.1 | SL2.50ch10:3418002..3418293 | 292 | - | n/a |
exon | exon:Solyc10g009350.2.1.2 | SL2.50ch10:3416530..3416567 | 38 | - | n/a |
exon | exon:Solyc10g009350.2.1.3 | SL2.50ch10:3416179..3416403 | 225 | - | 1 |
exon | exon:Solyc10g009350.2.1.4 | SL2.50ch10:3415870..3416090 | 221 | - | 1 |
exon | exon:Solyc10g009350.2.1.5 | SL2.50ch10:3415620..3415777 | 158 | - | 2 |
exon | exon:Solyc10g009350.2.1.6 | SL2.50ch10:3415149..3415542 | 394 | - | n/a |
exon | exon:Solyc10g009350.2.1.7 | SL2.50ch10:3414231..3415049 | 819 | - | 2 |
exon | exon:Solyc10g009350.2.1.8 | SL2.50ch10:3414014..3414033 | 20 | - | 2 |
intron | intron:Solyc10g009350.2.1.2 | SL2.50ch10:3416568..3418001 | n/a | - | n/a |
intron | intron:Solyc10g009350.2.1.3 | SL2.50ch10:3416404..3416529 | n/a | - | n/a |
intron | intron:Solyc10g009350.2.1.4 | SL2.50ch10:3416091..3416178 | n/a | - | n/a |
intron | intron:Solyc10g009350.2.1.5 | SL2.50ch10:3415778..3415869 | n/a | - | n/a |
intron | intron:Solyc10g009350.2.1.6 | SL2.50ch10:3415543..3415619 | n/a | - | n/a |
intron | intron:Solyc10g009350.2.1.7 | SL2.50ch10:3415050..3415148 | n/a | - | n/a |
intron | intron:Solyc10g009350.2.1.8 | SL2.50ch10:3414034..3414230 | n/a | - | n/a |
Add items to a list:
Related views |
User comments |
Please wait, checking for comments. (If comments do not show up, access them here)