Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Solanum lycopersicum mRNA Solyc10g017530.2.1

mRNA details  
Name
Solyc10g017530.2.1
Type
mRNA
Length
1,756
Organism
Solanum lycopersicum
Description
ATP-dependent RNA Helicase (AHRD V1 **** Q7PDT0_PLAYO); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch10:5510044..5519613
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
9570
Nb exon
9
Sifter term
GO:0004004
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g017530.2.1 ATP-dependent RNA Helicase (AHRD V1 **** Q7PDT0_PLAYO); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

GTTTCTGCAATCATTTCTCACATTTTCTTCACAACATCTTCAAAATTCTCTAAAATTTCTACCAAAAATTCTATACAATTTCTTCAAATTTGGTAGAACTTTTTTGTTTGTACATTTTTTTGTTAGATCGAATTTTAAGCTTCAGATAATACTTTTGTGGACGGTTTTTGTTGCTCCAATTAGTATTATTCTTTAGGGTTTTTGTTTTGAGATCCGGTTTATTTATTGGTTATGAATCCCAGAGGAAGATATCCACCGCCGGGAATGGGAAGCGGCGGCGGAGGCGGCGGACGCGGGGGCGGAAACATGTACCCTAACGCTAACCCTAATTTTCAACCGAGAAATCCACAGCAGTATGTGCAGAGAGGTCCGGTGAACCAGCAGCAGCAGTTTCAGAACCAACAGGCACAGCAATGGCTCAGAAGGAACCAGTTGGCATCTGATTCTACGGTTGATGAGGTTGAAAAGACGGTACAATCTGAAGCAGTTGATCAAAGTTCACAAGACTGGAAGGCGAGGTTGAAGATACCACCAGCGGATACTAGATACAGGACAGAGGATGTGACAGCGACCAAGGGAAATGAATTTGAAGACTATTTTCTTAAGCGTGAATTGCTTATGGGAATTTATGAAAAGGGTTTTGAAAGACCATCTCCAATCCAGGAAGAGAGTATCCCAATTGCTCTTACTGGGAGTGATATTTTGGCGAGGGCCAAAAATGGAACAGGGAAAACTGCTGCCTTCTGCATTCCGGCATTGGAAAAAATTGACCAGGACGTCAATGCCATTCAAGTTGTTATCCTTGTTCCTACGCGAGAATTGGCTCTTCAAACATCTCAAGTTTGCAAAGAACTTGGGAAGCACTTAAAAATTGAAGTCATGGTTACCACTGGGGGGACCAGCTTGAAGGATGATATAATGCGACTCTATCAACCGGTACATTTACTAGTTGGAACCCCTGGAAGAATACTCGACCTTGCGAGAAAGGGAATATGTGTTTTGAAAGATTGTTCCATGCTTGTCATGGATGAGGCTGATAAGCTTCTTTCTCCGGAGTTTCAACCTTCCATCGTGCAGCTGATTCGTTTCTTGCCAGCAAATCGTCAAGTTTTAATGTTCTCAGCTACATTCCCTGTCACAGTCAAGGACTTTAAAGAAAGATACTTGCAGAAGCCATATGTTATCAACCTTATGGATGAACTTACTCTCAAGGGTATAACTCAATTTTATGCCTTCGTAGAGGAAAGGCAGAAGCTTCATTGCCTTAACACTTTATTCTCAAAGCTTCAAATCAACCAATCAATTATCTTTTGCAACTCTGTAAACCGTGTGGAACTGCTTGCCAAGAAGATCACAGAATTAGGCTATTCATGCTTCTACATCCATGCAAAGATGCTTCAAGATCATAGGAACAGAGTATTTCATGACTTCCGTAATGGTGCCTGCAGGAACCTTGTTTGTACTGATCTGTTTACTAGAGGGATAGATATTCAAGCAGTCAATGTTGTTATAAATTTTGATTTCCCGAAGAACTCAGAGACATATTTACACAGGGTTGGGCGATCAGGGAGATTTGGGCATCTTGGTTTAGCTGTGAACCTGATTACTTATGAGGATCGCTTCAACCTGTACAGAATTGAACAAGAACTAGGAACAGAGATCAAGCAAATTCCTCCGCACATAGATCAGGCTATATATTGCCTTTGATCAGTTAGCTGCTCGGTTATGGTGCACCAATGGTGAGTCTTTTGTACAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g017530.2.1SL2.50ch10:5510274..5519564492+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g017530.2SL2.50ch10:5510044..55196139,570+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g017530.2.1.1SL2.50ch10:5510044..5510540497+n/a
exonexon:Solyc10g017530.2.1.2SL2.50ch10:5512392..551245261+n/a
exonexon:Solyc10g017530.2.1.3SL2.50ch10:5516145..5516379235+1
exonexon:Solyc10g017530.2.1.4SL2.50ch10:5517024..5517262239+n/a
exonexon:Solyc10g017530.2.1.5SL2.50ch10:5517708..5517959252+2
exonexon:Solyc10g017530.2.1.6SL2.50ch10:5518037..5518217181+n/a
exonexon:Solyc10g017530.2.1.7SL2.50ch10:5519160..551924889+n/a
exonexon:Solyc10g017530.2.1.8SL2.50ch10:5519330..551940374+2
exonexon:Solyc10g017530.2.1.9SL2.50ch10:5519486..5519613128+n/a
intronintron:Solyc10g017530.2.1.1SL2.50ch10:5510541..5512391n/a+n/a
intronintron:Solyc10g017530.2.1.2SL2.50ch10:5512453..5516144n/a+n/a
intronintron:Solyc10g017530.2.1.3SL2.50ch10:5516380..5517023n/a+n/a
intronintron:Solyc10g017530.2.1.4SL2.50ch10:5517263..5517707n/a+n/a
intronintron:Solyc10g017530.2.1.5SL2.50ch10:5517960..5518036n/a+n/a
intronintron:Solyc10g017530.2.1.6SL2.50ch10:5518218..5519159n/a+n/a
intronintron:Solyc10g017530.2.1.7SL2.50ch10:5519249..5519329n/a+n/a
intronintron:Solyc10g017530.2.1.8SL2.50ch10:5519404..5519485n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17948749%2Fdetails feature 17948749
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)