Solanum lycopersicum mRNA Solyc10g049720.1.1

mRNA details  
Name
Solyc10g049720.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g049720.1.1
Length
897
  
Description
BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH
Location(s)
SL2.50ch10:46503452..46505245
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
1794
Nb exon
5
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g049720.1.1 BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH

ATGGAGCATGTGGTATCAATGTCTGAAGGAGATTGGAGTTCGTTTAGTGGAATGTGTTTTACTGAGGAGGCGGATTTCATGGCACAGTTACTTGGTAACTGTTCGTTTCCAAATGAGTTACCAAGTAATTCTGGTTATTGGAATATTGGTCATGAATCAAATATTGGATCTTCAGGAGGAAGAGAACATAGTAGTTTCTTCTTTCCTCCCCTGAGTCATGAGAGTCACTACTCAAGTAATTCTCGGCCTATCTTGATGAGAAATGATAGTTCAATAACAACAGAACGTGGTCTGATGGATACTAATAATCCAATTGAAGCAGATGAGTACTTCGCTAATAACATGGAGTTTGATGCGAACATGGCTGAACCTCTTCTTGATGGAAAAGGCTTGCAGCTAGGAAGAATAGACTATGAAGATCATAGCCCAACAGAGAGTTCTAAGAAAAGAGTGCGGTTACATTGTCATGTACCAAAGAACAAGAGAAGTACAAAACTTCAAACAGAAGGTAAGACTGTCGAGATGGATATGAAAAGCAAGGCTGTGCTTCAGAGGCAAAACTCTATGGTCAGTTGCTGTTCAGAAGATGAATCTAATGTTTCTCTCGAGTTGAGACGGAAATCCAGAGCAAGCAGGGGTTCAGCAACTGACCCCCAGAGCATGTATGCCAGGAAAAGAAGAGAGCGAATTAATGAGAGATTGAAGACCTTACAGAGTCTCATACCTAATGGAACCAAGGTTGATATTAGTACCATGCTTGAAGAGGCAGTTCAGTATGTTAAGTTTTTGCAACTCCAAATCAAGCTGTTGAGCTCTGATGATCTATGGATGTATGCTCCCATTGCCTACAATGGAATGGACCTTGGGCTTGATCTGAGGATTGGCAATCCAAAATGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g049720.1.1SL2.50ch10:46503451..46505245299+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g049720.1SL2.50ch10:46503452..465052451,794+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g049720.1.1.1SL2.50ch10:46503452..46503919468+n/a
exonexon:Solyc10g049720.1.1.2SL2.50ch10:46504008..46504211204+n/a
exonexon:Solyc10g049720.1.1.3SL2.50ch10:46504296..4650436166+n/a
exonexon:Solyc10g049720.1.1.4SL2.50ch10:46504454..4650451966+n/a
exonexon:Solyc10g049720.1.1.5SL2.50ch10:46505153..4650524593+n/a
intronintron:Solyc10g049720.1.1.1SL2.50ch10:46503920..46504007n/a+n/a
intronintron:Solyc10g049720.1.1.2SL2.50ch10:46504212..46504295n/a+n/a
intronintron:Solyc10g049720.1.1.3SL2.50ch10:46504362..46504453n/a+n/a
intronintron:Solyc10g049720.1.1.4SL2.50ch10:46504520..46505152n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17953336%2Fdetails feature 17953336
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