Solanum lycopersicum mRNA Solyc10g049780.1.1

mRNA details  
Name
Solyc10g049780.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g049780.1.1
Length
819
  
Description
BHLH transcription factor (AHRD V1 *-** B4FMK3_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch10:46826241..46827561
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
1321
Nb exon
5
Sifter term
GO:0030528
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g049780.1.1 BHLH transcription factor (AHRD V1 *-** B4FMK3_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGGAGCCTGTATTTGAAGATGAATGGAGTGGAATGTGTTCCACTGATCAGGAGGCTGATTTCATGGCTCAGTTGCTTTGGCAGCCTAATAACATTGACAATATGTATTTTTCTAGTTATAATGGTTGTAATAGCTCTCAGATTTCCTTTCCGAGTCTTGAAAGCTACTATCAGAGTCATGTTCAGTCAATCTTGACGAGAAATGGAAGTTCAATAACAAAGGAAAATGGCATGGTGGAAGGTGAAAACACAAGTTCACCCTCTCAGGTGCTTGCTACTTACAATCCAATTGAGGCGGATGACTTCCTCAACCAAGATGTGAGCATGGAGTCTGGTGAAAACACGGCTAAAGTATTGGATAGTCCACCAGAGAGCTCAAAGAAAAAAAGATTGTGCAACCTGCTAGGGGATGTCCCAAAGAACAAGAGAAGCGTAAATCTGAAGAAGGCTAGTGAGATGGATGGAAAAAACAAGGCTGCACTTCAGCGGCAGAACTCGATAAGTTGCTGCTCAGAAGATGAATCTATTAATGTACCAAAATCCAGAGCTAGCAGAGGCTCAGCAACTGACTCCCAGAGCTTGTATGCTAGGAAAAGAAGAGAGAAAATTAATCAAAGATTAAGAATTTTGCAGAGTCTAGTCCCTAATGGAACAAAGGTTGATATTAGCACCATGCTTGAAGAGGCAGTCCAGTATGTCAAATTTTTGCAACTCCAAATCAAGCTTTTGAGCTCTGATGACCTATGGATGTATGCTCCCATTGCATACAACGGAATGGACATTGGCCTAGATCTAAAGATAGGCACTCCAAAATCGTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g049780.1.1SL2.50ch10:46826240..46827561273+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g049780.1SL2.50ch10:46826241..468275611,321+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g049780.1.1.1SL2.50ch10:46826241..46826651411+n/a
exonexon:Solyc10g049780.1.1.2SL2.50ch10:46826714..46826893180+n/a
exonexon:Solyc10g049780.1.1.3SL2.50ch10:46826986..4682705166+n/a
exonexon:Solyc10g049780.1.1.4SL2.50ch10:46827145..4682721066+n/a
exonexon:Solyc10g049780.1.1.5SL2.50ch10:46827466..4682756196+n/a
intronintron:Solyc10g049780.1.1.1SL2.50ch10:46826652..46826713n/a+n/a
intronintron:Solyc10g049780.1.1.2SL2.50ch10:46826894..46826985n/a+n/a
intronintron:Solyc10g049780.1.1.3SL2.50ch10:46827052..46827144n/a+n/a
intronintron:Solyc10g049780.1.1.4SL2.50ch10:46827211..46827465n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17953394%2Fdetails feature 17953394
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