Solanum lycopersicum mRNA Solyc10g054790.1.1
 mRNA details
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| Name | Type | Organism | |
|
Synonyms / aliases
mRNA:Solyc10g054790.1.1
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Length
987
|
|
Description
Aquaporin (AHRD V1 ***- Q40266_MESCR); contains Interpro domain(s) IPR000425 Major intrinsic protein
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|
Location(s)
SL2.50ch10:55950041..55951202
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0016020
- Length
- 1162
- Sifter term
- GO:0015250
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc10g054790.1.1 Aquaporin (AHRD V1 ***- Q40266_MESCR); contains Interpro domain(s) IPR000425 Major intrinsic protein
ATGGGTTCCAACAATAATATTTTTTTAGGTGATGAAGAAAGCCAGCTTTCTGCTGGTAATACTAATAGAGTTCAACCTTACTCTTCCACACCAAAAAAGAACACTATTGATGACGAGGGAAAGAAGCAAAACTTTCTCTCACTCTCTCAAAGGCTTGGCGTTCCTGACTTTTTTTCTTTGGACGTATGGCGAGCGTCGATGGGAGAACTCCTAGGCTCAGCGGTACTTGTTTTCATGGTGGATACTATAGTGATCTCTACTTCCGAAAGTGACGCTGAAATGCCAAATTTGATCATGTCAATTCTCTTAGCAATTGTGCTCATAGTTCTACTACTTGCGGTTGTTCCAGTGTCCGGAGGCCATCTCAACCCGGTTATCTCCTTCTCAGCTGCGCTAGTCGGAATTATATCTATGTCAAGAGCCATAATTTACATTATGGCTCAATGTCTTGGTGCAGTTTTAGGTGCACTAGCTCTCAAAGCTGTGGTTAGTTCAACAATTGAAGACACTTTCTCACTTGGTGGTTGCACTATCACAATAATTGCACCGGGCCCAAATGGGCCTGTAACTTTGGGCCTAGAGACGGCCCAAGCCTTGTGGCTTGAGATTTTTTGTACATTTGTTTTACTCTTTGCTTCAATTTGGATGGCTTATGATCATAGACAAGCTAAGGCTCTTGGCCTTGTCACTGTCTTGACCATTGTTGGTTTGGTGTTAGGCCTTCTAGTGTTTATCTCAACCACGGTCACCACGAAAAGGGGCTACGCCGGGGTAGGGATGAACCCGGCGAGGTGTTTGGGACCCGCGATCGTTAGAGGAGGTCACCTTTGGGATGGACATTGGATCTTTTGGATTGGTCCTACTATTAGTTGTCTGGCCTTTTATGTGTACACAAAGATTATTCCACCAAAACATTTCCATGCAGAATATGGATACAAACATGATTTTGTTGGAGTTGTTAAGGCTTTGTTTGAGTCGAATGTGTAA
ATGGGTTCCAACAATAATATTTTTTTAGGTGATGAAGAAAGCCAGCTTTCTGCTGGTAATACTAATAGAGTTCAACCTTACTCTTCCACACCAAAAAAGAACACTATTGATGACGAGGGAAAGAAGCAAAACTTTCTCTCACTCTCTCAAAGGCTTGGCGTTCCTGACTTTTTTTCTTTGGACGTATGGCGAGCGTCGATGGGAGAACTCCTAGGCTCAGCGGTACTTGTTTTCATGGTGGATACTATAGTGATCTCTACTTCCGAAAGTGACGCTGAAATGCCAAATTTGATCATGTCAATTCTCTTAGCAATTGTGCTCATAGTTCTACTACTTGCGGTTGTTCCAGTGTCCGGAGGCCATCTCAACCCGGTTATCTCCTTCTCAGCTGCGCTAGTCGGAATTATATCTATGTCAAGAGCCATAATTTACATTATGGCTCAATGTCTTGGTGCAGTTTTAGGTGCACTAGCTCTCAAAGCTGTGGTTAGTTCAACAATTGAAGACACTTTCTCACTTGGTGGTTGCACTATCACAATAATTGCACCGGGCCCAAATGGGCCTGTAACTTTGGGCCTAGAGACGGCCCAAGCCTTGTGGCTTGAGATTTTTTGTACATTTGTTTTACTCTTTGCTTCAATTTGGATGGCTTATGATCATAGACAAGCTAAGGCTCTTGGCCTTGTCACTGTCTTGACCATTGTTGGTTTGGTGTTAGGCCTTCTAGTGTTTATCTCAACCACGGTCACCACGAAAAGGGGCTACGCCGGGGTAGGGATGAACCCGGCGAGGTGTTTGGGACCCGCGATCGTTAGAGGAGGTCACCTTTGGGATGGACATTGGATCTTTTGGATTGGTCCTACTATTAGTTGTCTGGCCTTTTATGTGTACACAAAGATTATTCCACCAAAACATTTCCATGCAGAATATGGATACAAACATGATTTTGTTGGAGTTGTTAAGGCTTTGTTTGAGTCGAATGTGTAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc10g054790.1.1 | SL2.50ch10:55950040..55951202 | 329 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc10g054790.1 | SL2.50ch10:55950041..55951202 | 1,162 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc10g054790.1.1.1 | SL2.50ch10:55951105..55951202 | 98 | - | n/a |
| exon | exon:Solyc10g054790.1.1.2 | SL2.50ch10:55950930..55951014 | 85 | - | 1 |
| exon | exon:Solyc10g054790.1.1.3 | SL2.50ch10:55950041..55950844 | 804 | - | n/a |
| intron | intron:Solyc10g054790.1.1.2 | SL2.50ch10:55951015..55951104 | n/a | - | n/a |
| intron | intron:Solyc10g054790.1.1.3 | SL2.50ch10:55950845..55950929 | n/a | - | n/a |
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