Solanum lycopersicum mRNA Solyc10g054820.1.1
 mRNA details
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| Name | Type | Organism | |
|
Synonyms / aliases
mRNA:Solyc10g054820.1.1
|
Length
978
|
|
Description
Aquaporin (AHRD V1 ***- Q40266_MESCR); contains Interpro domain(s) IPR000425 Major intrinsic protein
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|
Location(s)
SL2.50ch10:55972910..55974198
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0016020
- Length
- 1289
- Sifter term
- GO:0015250
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc10g054820.1.1 Aquaporin (AHRD V1 ***- Q40266_MESCR); contains Interpro domain(s) IPR000425 Major intrinsic protein
ATGGCTTCAAAGAATAATGTTGTTTTTGGTGATGAGGAAAACCAGCTTCCTGGTGGGACTAATAAAGTTCAACCTTGTTCTTCTACATCAAGGAAGAATACTATTGACGATGAGGGAAAGAAGCCAATTTTTCTCTCATTCTCTGAAAGGCTGGGCGTTCCTGATTTCTTTTGTTTGGATGTATGGCGAGCGTCGATGGGAGAACTCCTAGGCTCAGCGGTTCTTGTTTTCATGTTGGATACTATAGTGATTTCCACTTTAGAAAGTGATACGAAAATGCCAAATTTGATCATGTCAATTCTCATTGCAATTGTGATCACAATTCTACTCCTGGCTGTTGTTCCGGTGTCAGGAGGCCATATCAATCCGATTATCTCCTTCTCGGCCGCGCTCGTCGGAATTATATCCATGTCAAGAGCCATAATTTACATAATGGCACAATGTGTTGGTGCAATTTTAGGTGCACTAGCTCTCAGAGCAGTGGTTAGTTCATCAATTGAAGACACTTTCTCACTTGGTGGTTGCACTATCACAATAATTGCACCAGGCCCAAATGGGCCCGTTATTGTGGGCCTAGAGATGGCCCAAGCCTTATGGCTAGAGATATTTTGTACATTTGTTTTTCTCTTTGCTTCAATTTGGATGGCTTATGATCATAGACAAGCTAAGTCTCTTGGACATGTCACTGTCTTGTCCATTGTTGGTGTAGTGTTAGGCCTTCTAGTGTTTATCTCGACCACGGTGACCGCGAGAAAGGGCTATGGAGGGGCGGGGATGAACCCGGCGAGATGTTTGGGGCCAGCTATTATTAGAGGAGGTCACCTTTGGGATGGACATTGGATCTTTTGGGTTGGACCAACTATTGGTTGTGTAGCCTTCTATGTGTACACAAAAATCATTCCACCAAAGCATTTTCTTGGAGAATATGGATTTAAGCATGATTTTGTTGGGGTTGTTAAGGCTTTGTCGAATGTATAA
ATGGCTTCAAAGAATAATGTTGTTTTTGGTGATGAGGAAAACCAGCTTCCTGGTGGGACTAATAAAGTTCAACCTTGTTCTTCTACATCAAGGAAGAATACTATTGACGATGAGGGAAAGAAGCCAATTTTTCTCTCATTCTCTGAAAGGCTGGGCGTTCCTGATTTCTTTTGTTTGGATGTATGGCGAGCGTCGATGGGAGAACTCCTAGGCTCAGCGGTTCTTGTTTTCATGTTGGATACTATAGTGATTTCCACTTTAGAAAGTGATACGAAAATGCCAAATTTGATCATGTCAATTCTCATTGCAATTGTGATCACAATTCTACTCCTGGCTGTTGTTCCGGTGTCAGGAGGCCATATCAATCCGATTATCTCCTTCTCGGCCGCGCTCGTCGGAATTATATCCATGTCAAGAGCCATAATTTACATAATGGCACAATGTGTTGGTGCAATTTTAGGTGCACTAGCTCTCAGAGCAGTGGTTAGTTCATCAATTGAAGACACTTTCTCACTTGGTGGTTGCACTATCACAATAATTGCACCAGGCCCAAATGGGCCCGTTATTGTGGGCCTAGAGATGGCCCAAGCCTTATGGCTAGAGATATTTTGTACATTTGTTTTTCTCTTTGCTTCAATTTGGATGGCTTATGATCATAGACAAGCTAAGTCTCTTGGACATGTCACTGTCTTGTCCATTGTTGGTGTAGTGTTAGGCCTTCTAGTGTTTATCTCGACCACGGTGACCGCGAGAAAGGGCTATGGAGGGGCGGGGATGAACCCGGCGAGATGTTTGGGGCCAGCTATTATTAGAGGAGGTCACCTTTGGGATGGACATTGGATCTTTTGGGTTGGACCAACTATTGGTTGTGTAGCCTTCTATGTGTACACAAAAATCATTCCACCAAAGCATTTTCTTGGAGAATATGGATTTAAGCATGATTTTGTTGGGGTTGTTAAGGCTTTGTCGAATGTATAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc10g054820.1.1 | SL2.50ch10:55972909..55974198 | 326 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc10g054820.1 | SL2.50ch10:55972910..55974198 | 1,289 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc10g054820.1.1.1 | SL2.50ch10:55974104..55974198 | 95 | - | n/a |
| exon | exon:Solyc10g054820.1.1.2 | SL2.50ch10:55973805..55973889 | 85 | - | 1 |
| exon | exon:Solyc10g054820.1.1.3 | SL2.50ch10:55972910..55973707 | 798 | - | n/a |
| intron | intron:Solyc10g054820.1.1.2 | SL2.50ch10:55973890..55974103 | n/a | - | n/a |
| intron | intron:Solyc10g054820.1.1.3 | SL2.50ch10:55973708..55973804 | n/a | - | n/a |
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