Solanum lycopersicum mRNA Solyc10g055630.1.1
 mRNA details
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| Name | Type | Organism | |
|
Synonyms / aliases
mRNA:Solyc10g055630.1.1
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Length
852
|
|
Description
Aquaporin (AHRD V1 ***- Q8W506_TOBAC); contains Interpro domain(s) IPR012269 Aquaporin
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|
Location(s)
SL2.50ch10:57108314..57109721
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0016020
- GO:0016021
- Length
- 1408
- Sifter term
- GO:0015250
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc10g055630.1.1 Aquaporin (AHRD V1 ***- Q8W506_TOBAC); contains Interpro domain(s) IPR012269 Aquaporin
ATGTCGAAGGACGTGATTGAAGAAGGACAAGCTCATCATCATGGAAAGGACTATGTTGACCCTCCTCCAGCTCCTCTTCTCGACATGGCTGAGCTTACCAAATGGTCTTTTTACAGAGCTCTTATAGCTGAATTCATCGCCACCCTTCTCTTCCTCTATGTCACCGTTGCTACTGTTATCGGTCACAAGAAACTCAACGCTCTAGACCAATGTGATGGTGTTGGGATTCTTGGAATTGCGTGGGCTTTTGGTGGAATGATCTTTGTCCTTGTTTACTGCACTGCTGGAATTTCTGGTGGTCATATTAACCCGGCGGTGACATTTGGGTTGTTCTTGGCAAGGAAAGTGTCATTGATAAGAGCAGTTGCTTACATAATTGCACAGTCACTTGGTGCTATTTGTGGTGTTGGTTTCGTTAAGGCATTCATGAAGCATTACTACAACACAGAAGGTGGAGGTGCTAACTTTGTGCAACCTGGTTACAACAATGGAACTGCTTTGGGTGCTGAAATTATTGGTACTTTTGTGCTTGTTTACACCGTCTTCTCTGCTACTGACCCTAAAAGAAGCGCTCGTGATTCCCATGTCCCTGTGTTGGCTCCTCTTCCAATTGGATTTGCTGTTTTCATGGTTCATTTGGCCACCATCCCCATTACTGGAACTGGTATTAACCCAGCAAGGAGCTTTGGAGCTGCAGTTATTTACGGCAACGAAAAAATCTGGGATGACCAATGGATATTCTGGGTTGGACCCATGGTGGGAGCAATGGCAGCAGCAATATACCATCAGTTTATATTGAGAGCTGGAGCTGTAAAAGCTTTGGGATCATTCCGCAGCAACCAAACCAACTAA
ATGTCGAAGGACGTGATTGAAGAAGGACAAGCTCATCATCATGGAAAGGACTATGTTGACCCTCCTCCAGCTCCTCTTCTCGACATGGCTGAGCTTACCAAATGGTCTTTTTACAGAGCTCTTATAGCTGAATTCATCGCCACCCTTCTCTTCCTCTATGTCACCGTTGCTACTGTTATCGGTCACAAGAAACTCAACGCTCTAGACCAATGTGATGGTGTTGGGATTCTTGGAATTGCGTGGGCTTTTGGTGGAATGATCTTTGTCCTTGTTTACTGCACTGCTGGAATTTCTGGTGGTCATATTAACCCGGCGGTGACATTTGGGTTGTTCTTGGCAAGGAAAGTGTCATTGATAAGAGCAGTTGCTTACATAATTGCACAGTCACTTGGTGCTATTTGTGGTGTTGGTTTCGTTAAGGCATTCATGAAGCATTACTACAACACAGAAGGTGGAGGTGCTAACTTTGTGCAACCTGGTTACAACAATGGAACTGCTTTGGGTGCTGAAATTATTGGTACTTTTGTGCTTGTTTACACCGTCTTCTCTGCTACTGACCCTAAAAGAAGCGCTCGTGATTCCCATGTCCCTGTGTTGGCTCCTCTTCCAATTGGATTTGCTGTTTTCATGGTTCATTTGGCCACCATCCCCATTACTGGAACTGGTATTAACCCAGCAAGGAGCTTTGGAGCTGCAGTTATTTACGGCAACGAAAAAATCTGGGATGACCAATGGATATTCTGGGTTGGACCCATGGTGGGAGCAATGGCAGCAGCAATATACCATCAGTTTATATTGAGAGCTGGAGCTGTAAAAGCTTTGGGATCATTCCGCAGCAACCAAACCAACTAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc10g055630.1.1 | SL2.50ch10:57108313..57109721 | 284 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc10g055630.1 | SL2.50ch10:57108314..57109721 | 1,408 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc10g055630.1.1.1 | SL2.50ch10:57108314..57108608 | 295 | + | n/a |
| exon | exon:Solyc10g055630.1.1.2 | SL2.50ch10:57108929..57109224 | 296 | + | 2 |
| exon | exon:Solyc10g055630.1.1.3 | SL2.50ch10:57109384..57109524 | 141 | + | n/a |
| exon | exon:Solyc10g055630.1.1.4 | SL2.50ch10:57109602..57109721 | 120 | + | n/a |
| intron | intron:Solyc10g055630.1.1.1 | SL2.50ch10:57108609..57108928 | n/a | + | n/a |
| intron | intron:Solyc10g055630.1.1.2 | SL2.50ch10:57109225..57109383 | n/a | + | n/a |
| intron | intron:Solyc10g055630.1.1.3 | SL2.50ch10:57109525..57109601 | n/a | + | n/a |
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