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Solanum lycopersicum mRNA Solyc10g078380.1.1

mRNA details  
Name
Solyc10g078380.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g078380.1.1
Length
786
  
Description
Transcription factor bHLH106 (AHRD V1 **-* BH106_ARATH); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch10:60202280..60204245
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
1966
Nb exon
2
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g078380.1.1 Transcription factor bHLH106 (AHRD V1 **-* BH106_ARATH); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGCAACAACAACAAGAAGACTTTCAAGAAAACTTGGAATCTTGCAATTATTTCTCCAAAAATAAATCATCATCAAGTGATAATAATATGATGGGAGAATATTATGGTTTTGATATTGAAGCTATTAAAAACTTTTGTAGCTCTTCCCCATTTTACCCTCAACATAATCATGTGGAATTTCAAGAAACTATAGAGAGTAATAATAATAGTCCAGAAAGTAGAGCTAAAAATCATAAAGAAGCTGAAAGAAGAAGAAGAGAAAGGATTAATTCTCATCTTCATAGCCTCAGAACCCTACTATCTTGCAATTCTAAGTTGGATAAAGCTTCATTACTAGCCAAAGTTGTTCAACGTGTAAGGGAACTCAAAGAACAAACTTCACAAATTATGCAAAGTGAAACAAACTTATTATTCCCTTCAGAAACTGATGAAATCACTGTGTTATCATCAAATGATTGTTTAGCTGATGGAAGATTACTCATCAAGGCCTCTCTTTGTTGTGAGGATCGATTCGATCTCATCCCTGACCTAATTGAAACCCTAAAATCACTTGGATTGAGTCCTATAAGAGCTGAAATGGTCACATTAGGAGGGAGAATCCATAATGTGATTGTATTAGCTGTTGATCATAAAAAGGAGAGTAATAATAACAATACTGATCATGATGAATCGTCGTTATTGTTCTTGAGAGATGCTTTGAGGTCTATAGTTCAACGTTCGAGTTATGGTACAGGTGAACGAGGTAAAAGACGAAGAGTATTAGGTCAAGGAACAAGGAATTACTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g078380.1.1SL2.50ch10:60202279..60204245262+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g078380.1SL2.50ch10:60202280..602042451,966+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g078380.1.1.1SL2.50ch10:60202280..60202594315+n/a
exonexon:Solyc10g078380.1.1.2SL2.50ch10:60203775..60204245471+n/a
intronintron:Solyc10g078380.1.1.1SL2.50ch10:60202595..60203774n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17958879%2Fdetails feature 17958879
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