Solanum lycopersicum mRNA Solyc10g079050.1.1

mRNA details  
Name
Solyc10g079050.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g079050.1.1
Length
1,143
  
Description
BHLH transcription factor (AHRD V1 *-*- B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch10:60680325..60682814
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2490
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g079050.1.1 BHLH transcription factor (AHRD V1 *-*- B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGGATTCATCAGAGTTTGAGAAAAACCAGAACAATTCTGGGTTATTAAGGTTTCGTTCAGCCCCAAGTTCATTTCTTGAAAATTTCATTGATGGAGTTGGGAATAATGGAAATATGGGTAGTGAGAATAAAGGGTTGTCATCAAAATTCAATCTTGATGGTTTAAATAACCAATTGGTTTCTCAGAATTCTCTTGATAGTAAAGTTTTTGCAAATTTGAGTAGTAATTCACAGTTGCCACCTCAATATCCAAGGCAAAATTCTACTGTTCATATGGTGGGGTCAATGGAAGGGGGTGGTGGGTACAGGGTGATGGGGTCAGTATTGGGAAATAGTAATAATCATCATCAGGGGCAAAATAAATTGGCATCAAATCTTATGAGGCAAAACAGTTCTCCAGCTGGTTTATTCTCTCAACTCAATTCTCTAAATGGCTATGCTACGTTGAAAGGCGGTGCTGGAGGTTATAGAATGGCAACTGGTGCCAATGGAGATCCAAATCCATCTTCAAGCAGGTTGAAAGATCATTTTGGCTTCTCATCAGTGACACCTTCTTCATTAGGAATGTTGTCTCGAATCTCAGAAGTCGATGATGAGAGCAGCATAGCAACTGATCTCGATGATGATGAGAAGCGTGGAAATGGCAACTCAGAACCTCAACTCTACAATATGGGATTTCCTTTTAATTCTTGGAGTGATCATTCACAGTTTCAGCAGACACTCACAGGCCACAAAAGGGAGTTGGATAGTGAGGGGAATAAGCTATTTGCTAATGCTCAGATTGAAGAGCTTGGAAACCGGCCCCCAATTTTGTCACACCACCTAAGTTTACCAAAGACACCAGCTGATATAGCAGCTATGGAGAAGTTATTGCATTTTCAAGACACTATTCCCTGCAAGATCCGCGCCAAACGTGGCTGTGCTACTCATCCTAGAAGCATTGCAGAAAGGGTGAGAAGAACACGTATCAGTGAACGAATGAGAAAGCTACAAGAGCTAGTTCCCAACATGGACAAGCAAACAAACACCGCGGACATGCTAGACTTGGCTGTCGAGTACATTAAAGGCCTCCAAAAACAATACAAGGTACTCACTGATTGTCGCGCTAACTGCAAATGCTCAGCAATGCAGAAACCAGATTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g079050.1.1SL2.50ch10:60680324..60682814381-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g079050.1SL2.50ch10:60680325..606828142,490-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g079050.1.1.1SL2.50ch10:60682382..60682814433-n/a
exonexon:Solyc10g079050.1.1.2SL2.50ch10:60681145..60681491347-2
exonexon:Solyc10g079050.1.1.3SL2.50ch10:60680884..60681054171-n/a
exonexon:Solyc10g079050.1.1.4SL2.50ch10:60680629..6068069466-n/a
exonexon:Solyc10g079050.1.1.5SL2.50ch10:60680466..6068053469-n/a
exonexon:Solyc10g079050.1.1.6SL2.50ch10:60680325..6068038157-n/a
intronintron:Solyc10g079050.1.1.2SL2.50ch10:60681492..60682381n/a-n/a
intronintron:Solyc10g079050.1.1.3SL2.50ch10:60681055..60681144n/a-n/a
intronintron:Solyc10g079050.1.1.4SL2.50ch10:60680695..60680883n/a-n/a
intronintron:Solyc10g079050.1.1.5SL2.50ch10:60680535..60680628n/a-n/a
intronintron:Solyc10g079050.1.1.6SL2.50ch10:60680382..60680465n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17959528%2Fdetails feature 17959528
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)