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Solanum lycopersicum mRNA Solyc10g079070.1.1

mRNA details  
Name
Solyc10g079070.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g079070.1.1
Length
1,086
  
Description
Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch10:60701458..60706201
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4744
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g079070.1.1 Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGGATAATCTGATAGAGTGTATTGAAGCAGGAGAAGCTAGATCCGAGAATTGCGGAGCTAGAATGGGAGAAATTAAAGATGGGTTTCATCAATTTGGTGAGGAAATTTTGTCTGTTACGTCGGAAGGTGGAAGTTCTTTCACTGCTTTACTTGGGCTTCCGCCGAATCAAGCGGTGGAGCTTTTGGTTCAGTCACCGGAAACTGACAAAATAGCATCAGATAAGCTTGCTATCAGTGAACCTCACTATCGTTATCCTCCTCCTCCTCCGATTTTTCCTTCAGATATCGCTTTGATCGATAGAGCTTCTAAGTTCTCCGTCTTCGCCGCCGCCGGTAACTCCCCGGAGTCCAATTCAACCCTTTCGAATTCCGGGTCGAAATCACTGTTCGTCAAGCAAGAACCCCTAGATTCCGAATGTAACCACAACTCATCTCCGGCGACTTCCAATCCACTAGTCCATCAGAAATCAACAAAGAGAAAGGAACGCGAGAAAAAGGTAAAAGAAACTTCTAAAAAGGGGAAAAAATCAGCTAACGATACCTCAGAAGACGGCGGCGAGAAGCTACCATATGTTCACGTCCGAGCGCGTCGAGGCCAAGCCACTGATAGCCATAGTTTAGCAGAAAGAGCAAGGAGAGAGAAGATTAATGCTAGGATGAAGCTACTACAAGAACTGGTCCCAGGATGTAACAAGATTTCAGGTACTGCAATGGTGTTGGATGAGATCATCAACCATGTACAGTCCCTACAGCGCCAAGTGGAGTTCTTATCAATGAGACTTGCTGCGGTTAACCCGAGAGTTGATTTCAACCTCGAAAGTCTTTTTGCAGCAGAACGGAGTGGTTCCCATGTGGAGAGTAACTTACAAGACATGGTTGTGCCGCCTATCTGGGCTGAGGGACAAAGCAGCGGAAACAGAAACCAATATCAACATCTATGGCTTATTGAAGGGTTCCATCAGCCTGCCTGGGGAAGGTTAGAAGACAATTCTAGCTTTGTTACACCAGAGAACTCGCTGTTGACATATGATTCCTCAGCAAATTCAGCATCTTTACATCCAAATCAGCTGAAAATGGAGCTATGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g079070.1.1SL2.50ch10:60701457..60706201362+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g079070.1SL2.50ch10:60701458..607062014,744+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g079070.1.1.1SL2.50ch10:60701458..60701955498+n/a
exonexon:Solyc10g079070.1.1.2SL2.50ch10:60702119..60702250132+n/a
exonexon:Solyc10g079070.1.1.3SL2.50ch10:60702349..6070241466+n/a
exonexon:Solyc10g079070.1.1.4SL2.50ch10:60704066..6070413469+n/a
exonexon:Solyc10g079070.1.1.5SL2.50ch10:60704929..6070500072+n/a
exonexon:Solyc10g079070.1.1.6SL2.50ch10:60705806..60706016211+n/a
exonexon:Solyc10g079070.1.1.7SL2.50ch10:60706164..6070620138+2
intronintron:Solyc10g079070.1.1.1SL2.50ch10:60701956..60702118n/a+n/a
intronintron:Solyc10g079070.1.1.2SL2.50ch10:60702251..60702348n/a+n/a
intronintron:Solyc10g079070.1.1.3SL2.50ch10:60702415..60704065n/a+n/a
intronintron:Solyc10g079070.1.1.4SL2.50ch10:60704135..60704928n/a+n/a
intronintron:Solyc10g079070.1.1.5SL2.50ch10:60705001..60705805n/a+n/a
intronintron:Solyc10g079070.1.1.6SL2.50ch10:60706017..60706163n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17959566%2Fdetails feature 17959566
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