Solanum lycopersicum mRNA Solyc10g079130.1.1

mRNA details  
Name
Solyc10g079130.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g079130.1.1
Length
1,578
  
Description
Calcium-dependent protein kinase 4 (AHRD V1 ***- Q5EDD1_CAPAN); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
Location(s)
SL2.50ch10:60740409..60744010
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006468
  • GO:0005509
Length
3602
Nb exon
8
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g079130.1.1 Calcium-dependent protein kinase 4 (AHRD V1 ***- Q5EDD1_CAPAN); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

ATGGGTAATTGTTGTGCAGTACCAAAAACTTCAGAAACAGAGGAGAAGAAAAGGGGGAAGAATAAGCCAAATCCATTTTCTGTTGATTATGGTCATCATGGGAATGGACACAAGTCCTATGTGTTGGATAATCCAACTGGTACTGATATTGAGGCAACGTATGAGTTAGGGCGTGAGCTTGGTCGAGGTGAATTTGGGGTTACATATTTGTCTACTGACAAAGTAAGTGGAGAAGTGTATGCTTGTAAATCAATATCGAAGAAGAAACTTAGGACTCGAGTGGATATCGAGGATGTAAGGAGAGAAGTTGAGATCATGAAGCATTTGCCTAAGCATCCTAATATTGTAACCTTAAAGGATACTTATGAGGATGATAATGCAGTGCATATAGTTATGGAGCTGTGTGAGGGTGGTGAGCTATTTGATCGGATCGTTGCAAGGGGGCATTATACCGAGAGGGCAGCAGCTGCGGTGACTCGCACAATTGTTGAAGTGATTCAGATGTGCCATAAGCATGGAGTTATGCATCGGGACCTCAAGCCTGAAAATTTCTTGTTTGAAAACAAGAAAGAGACAGCACCATTGAAGGCAATTGATTTTGGTCTCTCAGTATTCTTTAAGCCTGGTGAGAGATTTAACGAAATTGTGGGAAGTCCGTACTACATGGCGCCCGAGGTGCTGAAGAGAGACTATGGTCCAGAAGTAGATGTCTGGAGTGCTGGAGTAATTCTCTACATCTTGCTATGTGGTGTTCCACCATTTTGGGCAGAAACTGAACAAGGAGTTGCACAAGCAATCATTCGTTCTGTTGTGAATTTTAAAAGGGACCCTTGGCCTAAGGTATCCGACAATGCAAAAGACCTTGTGAAGAAGATGCTTAACCCTGATCCTAGCCAGAGGCTTACTGCTCAAGAAGTTCTAGATCATCCCTGGATACAAAATGCAAAGAAGGCTCCAAATGTTTCTTTGGGTGAAACAGTGAAAGCAAGGCTCAAGCAATTCTCTATGATGAACAAGCTAAAGAAAAGAGCTTTAAGGGTGATTGCTGAGCATTTGACAGTGGACGAAGTGGCTGGAATAAAGGAGGGATTCCAATTGATGGATATAAGTAACAAAGGGAAGATTGACGTTAACGAGTTGAGAGTTGGGTTGCAGAAACTTGGCCATCAAATTCCCGAATCTGATGTACAGATTCTTATGGATGTTGGTGATGTCGATAAAGATGGATTTTTGGACTACGGGGAATTTGTAGCAATTTCAGTCCATCTAAGAAAGATGGCAAATGAGGAGCACCTGAAGAAGGCATTTGATTTTTTTGATAGGAACCAAAATGGATATATAGAGATTGAGGAATTAAGGGAAGCCTTAGATGACGAGATTGAAACCAACAGTGAAGAAGTTATCAATGCTATTATGCAAGATGTAGACACTGACAAGGATGGACGGATAAGTTACGATGAATTCTCTACTATGATGAAGGCTGGAACAGATTGGAGGAAGGCATCAAGACAGTATTCACGAGAACGATATAATAGTCTCAGTTTGAAACTGATGAAGGATGGATCCTTACAAAGCTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g079130.1.1SL2.50ch10:60740408..60744010526-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g079130.1SL2.50ch10:60740409..607440103,602-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g079130.1.1.1SL2.50ch10:60743510..60744010501-n/a
exonexon:Solyc10g079130.1.1.2SL2.50ch10:60742755..60742878124-n/a
exonexon:Solyc10g079130.1.1.3SL2.50ch10:60742524..60742667144-2
exonexon:Solyc10g079130.1.1.4SL2.50ch10:60741764..60741916153-2
exonexon:Solyc10g079130.1.1.5SL2.50ch10:60741512..60741627116-2
exonexon:Solyc10g079130.1.1.6SL2.50ch10:60741225..60741392168-n/a
exonexon:Solyc10g079130.1.1.7SL2.50ch10:60740698..60740928231-n/a
exonexon:Solyc10g079130.1.1.8SL2.50ch10:60740409..60740549141-n/a
intronintron:Solyc10g079130.1.1.2SL2.50ch10:60742879..60743509n/a-n/a
intronintron:Solyc10g079130.1.1.3SL2.50ch10:60742668..60742754n/a-n/a
intronintron:Solyc10g079130.1.1.4SL2.50ch10:60741917..60742523n/a-n/a
intronintron:Solyc10g079130.1.1.5SL2.50ch10:60741628..60741763n/a-n/a
intronintron:Solyc10g079130.1.1.6SL2.50ch10:60741393..60741511n/a-n/a
intronintron:Solyc10g079130.1.1.7SL2.50ch10:60740929..60741224n/a-n/a
intronintron:Solyc10g079130.1.1.8SL2.50ch10:60740550..60740697n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17959630%2Fdetails feature 17959630
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