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Solanum lycopersicum mRNA Solyc10g079660.1.1

mRNA details  
Name
Solyc10g079660.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g079660.1.1
Length
2,094
  
Description
Importin alpha-1b subunit (AHRD V1 *-*- B6T451_MAIZE); contains Interpro domain(s) IPR011989 Armadillo-like helical
Location(s)
SL2.50ch10:61156822..61162264
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0005488
  • GO:0045449
Length
5443
Nb exon
13
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g079660.1.1 Importin alpha-1b subunit (AHRD V1 *-*- B6T451_MAIZE); contains Interpro domain(s) IPR011989 Armadillo-like helical

ATGTTAGCCATTTCTTCTTCTTCTCCTCCTTTATTTTCTACTACTACTAATAATTTTGGTTGGCTTTTGGAAGATCTTATAAGCCATGAATTAACAAATAGTGGAGAAACTTCAAATTCATCTCAAAAAAGCCTTCAACATTGTGATTCAAATAAATTTGATCAAATTATTATCAACAGTGGTGATCAGTATCAACCTGATCAGACGGTTAAGAAGCTTAATCATAACGCAAGTGAACGTGACCGTAGAAAGAAAATCAACAGCTTATATTCTTCTCTTCGTTCTTTACTACCTCCTTCTGATCATACGAAAAAGCTAAGCATTCCATCAACAGTATCAAGAATTCTAAAGTACATACCAGAATTACAAAGTGAAGTTGAAAGATTGGTTCAAAAGAAAGAAGAATTTACATCAAAAAATATTTTGAATAAACCAAAAAGAATAAAAGGAGGAATTGAGAATTCTTCATTTGTTATTTCAACAAGTGAATTAGGTGACAAAGAAATAGTGATTCAAATATCAACTTTGAAGATCAATAAAGGTTCAATTAGTGAGGCTATTTCACAATTAGAAGATGAAGGACTTGTTCTACTAAATGCAACTTCTTTTGAGACTTTTGAAGATAGAGTATTCTACACATTGCATTTTCAGTTTGAGAAGTTACCAGAGATGATGAAAGATTTCACTGTGGGCTTAGCTTTGATTGAGCAGTTACCAAATATCGCGCCGTTTTTGTTGGAGTCAGCTGCCTATAGGATCATGCTTTTAATTGTGAACAAGGATGATGATCATTACGATCTTGATATGGATTGTTTTTTCAATAATGGGATTGTAGACAATCTAGTTGAATGTTGTAGATCAAGAAATTGGCGTAGTCTTCGTAGGCAAGCTGCTGAGACATTACGTGAATTGGTTAATTGTGGAACGATGGCACAGAATCAGGAATTGCTTAGACGTGGTGTCGTTACAATTTTTCTGCAAATGCTTAATGATGAGGAAGCTATAGACCTTGATGATGAGGAGTGGTTTGATGACTTATTAGTTGTTGAGGCTGTGAAGACTTTGGCTTTATTGTCAACTAAAGTAGATGTCAGGGGTGACTTGGTTACTGCATTTGTTGAGCAAAATCTGTGTAGAAGGCTGATGTTACTTTTCAGGAATACTAGACACACCATAGTTGAAAATGTGTTGACATTTGTGGAGAACTTTCTTACTATAGGAACTGAAGAGCAAATGCAGGTTCTTCTTGACAACCAAGTTTTGCATCATCTCAGACTTGTAATTGTCGAGCCTGTGGTGTCCGATTTATACCTCCTAGGTGGACAATATAAGGTAGTAGAGATTTTGGGCAATTTTGCTCGTCGTTCAAGAAGGTTGAGGGATCTTGTTATTGACAGCGGTGAAGATCTCATCTCATTATTTCGAGTCCTTCGTTCCCTAGCAGATGATTCCATCGTTGCATTTGACGCTTCACCAGCAATCAGTGCTGCCAGGACAATAGGATACTTGTGTTTTGGTAGTCCACCTCCACCATTTGATAAGTTGAGACCATCACTACCAATCCTCCGGTTTCTCATAAATCAACTGGAACCTCATATAGGAGAAAGAGCTTGTCCTGTTATTAAGCATGCCTGCTTGATTATTGCATGTCTGGCACGCGGTGGATTTGATCCTATAAATGCTTTGATTGATGAAAATATGTGCCCGATCCTGGTGATGCTTTTGGCACATCCTCACAGTGAGGTTGTTGCAAGTGTGCTGAAGGTTGTAGAGAACTTCCTCAAGAATGGAACTGATAATCAAATTCAGGTTCTCCATGACAGCCAAGTTCTTCAACATGTTTTAGAAATTGTAATGAATCATGACAACCTACCTCCTTTACATCTGAGGAGTGTTTGTCGTGCCATCGCCAATATAGTGAATTACAGGAGCAGTCAAATCCAGAGAATGGTTGATGCAGGTATCTTCCCTTCGATTATTCAGATTTCGATTAACCAAGAGGTTGGTGATACCAAATATGAGGCTATATACGCCATCTCAAGCGTTGTCACGAGGGGATCTCACGAGCAGATTAGGGTCTCCGCGGTATTCTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g079660.1.1SL2.50ch10:61156821..61162264698+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g079660.1SL2.50ch10:61156822..611622645,443+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g079660.1.1.1SL2.50ch10:61156822..61157130309+n/a
exonexon:Solyc10g079660.1.1.10SL2.50ch10:61161562..6116164382+1
exonexon:Solyc10g079660.1.1.11SL2.50ch10:61161726..61161860135+n/a
exonexon:Solyc10g079660.1.1.12SL2.50ch10:61161946..61162076131+n/a
exonexon:Solyc10g079660.1.1.13SL2.50ch10:61162246..6116226419+1
exonexon:Solyc10g079660.1.1.2SL2.50ch10:61157499..61157840342+n/a
exonexon:Solyc10g079660.1.1.3SL2.50ch10:61159472..61159598127+n/a
exonexon:Solyc10g079660.1.1.4SL2.50ch10:61159693..61159796104+2
exonexon:Solyc10g079660.1.1.5SL2.50ch10:61159883..61160050168+n/a
exonexon:Solyc10g079660.1.1.6SL2.50ch10:61160528..61160634107+n/a
exonexon:Solyc10g079660.1.1.7SL2.50ch10:61160720..6116080182+1
exonexon:Solyc10g079660.1.1.8SL2.50ch10:61160887..61161189303+n/a
exonexon:Solyc10g079660.1.1.9SL2.50ch10:61161284..61161468185+n/a
intronintron:Solyc10g079660.1.1.1SL2.50ch10:61157131..61157498n/a+n/a
intronintron:Solyc10g079660.1.1.10SL2.50ch10:61161644..61161725n/a+n/a
intronintron:Solyc10g079660.1.1.11SL2.50ch10:61161861..61161945n/a+n/a
intronintron:Solyc10g079660.1.1.12SL2.50ch10:61162077..61162245n/a+n/a
intronintron:Solyc10g079660.1.1.2SL2.50ch10:61157841..61159471n/a+n/a
intronintron:Solyc10g079660.1.1.3SL2.50ch10:61159599..61159692n/a+n/a
intronintron:Solyc10g079660.1.1.4SL2.50ch10:61159797..61159882n/a+n/a
intronintron:Solyc10g079660.1.1.5SL2.50ch10:61160051..61160527n/a+n/a
intronintron:Solyc10g079660.1.1.6SL2.50ch10:61160635..61160719n/a+n/a
intronintron:Solyc10g079660.1.1.7SL2.50ch10:61160802..61160886n/a+n/a
intronintron:Solyc10g079660.1.1.8SL2.50ch10:61161190..61161283n/a+n/a
intronintron:Solyc10g079660.1.1.9SL2.50ch10:61161469..61161561n/a+n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17960197%2Fdetails feature 17960197
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