Sol Genomics Network

Solanum lycopersicum gene Solyc10g085670.1

Name Solyc10g085670.1	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc10g085670	Length 5,459

Description

Receptor like kinase, RLK

Location(s)

SL2.50ch10:64774341..64779799

GFF source

ITAG_eugene

From BOGAS: 1

Length: 5459

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc10g085670.1.1	SL2.50ch10:64774341..64779799	2,895	-	n/a

Add items to a list:

Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc10g085670.1 SL2.50ch10:64779799..64774341 (sequence from reverse strand)
ATGGCAGCTACCCGGCTGTTGCTCTGCTTTATCGTCTTCTCGTCTGGCATCGATTTCATATACACTGTTACAGATCCTAGAGATGGTAAGAACATTGTATAAAATTGTGAATCCAGTATTTAAACTTTATGAGTTTTACTATTTGTTTGCAGTTTTTGTGAACTTTTACTCGTAAATTGATGTTCTGCGTTGAAAGTATTGAGTTCAGATAATTATGTTGTTATGAATAAGTGTGAATTTGGTTGATTGCAGTAACGATACTTCGATCACTGAAAGATCAGTGGGAAAATACGCCGCCTAGTTGGCAGAAATCGGATGATCCTTGTGGAACATCATGGGAAGGTGTAACTTGCAACAACTCAAGGGTAACTGCATTGTGAGTATGCTTGTTTCTTCCAATATCTGGGGATCGTGTGGCTTACATTCTAGTTATACGATGATTAATAACACATGAATTGTTATGCATGATTGAGTAATTTAAGTGCATTTCCGCCTTTAAAAAAAAAGCTACCTAATTACACATATATCGCTATCATATATACTATTACCTATACTTTCAAAAGATTATGTATGTTACCACTAATTAAGAGTTTCCTACCATAACACTTAGAAACATGTATTTTTGCTACCGGATACACTAAAATAGGGAGAGAGGAGAGTGAAATGGTGAGGGAGGCGAGCCAGATTGGCTATGTATCCAGATACATAGGAGAGTGGGGAGTGAGATGGGAGAGATACGAGAGAGACAAACGAGATTTGTTATATATTCCATACACATGTGAATCCCCTTAGATACAATATATCTAGAACAAATTACACCTAATTTTTGCCCTATGTATCCCGAGATACATGCATCTGAACACACCAAAATATGGTAAGATACGTAATATTGCAAACTAGAGTGTATCTAAGTAATTAGCTCCTAAACTAGTGGGATTTACGTAAGTTTCTCCCTTTTTTATACACCAAGCCACATCTTAGTTTTTGAAATTGTTGTTTCACCAACGAAGCAGTTGTTAACAATTGATTGTGTTTATTATTTCTTTCAGGGGATTATCAACGATGGGACTGAGAGGAAAATTAAGTGGTGACATTGGAGGGCTCACTGAATTAATTTCCTTGTAAGTTTGGTTTTAAATCCAATAAACTTCTGTTGATTATGTAGAATAAGCTTGTATTTGTCACCATACTTTGCTCACTTCAGTTGCTATACTTGTATTGCAGAGACCTGTCGTTCAACCGAGGACTTACAGGTTCCCTGTCTCCGCGGATTGGAGATCTGCAGAAACTAAACATATTGTAAGACTACGAAATCTTGATTGTATAGTGTATGCCTGCTATGTACACAAAATTGACATTTATAATACATTTGTCATAGAATGATCATTTGATCAGCTTTCTTCTTCGTAATTTTGAATCATGATTCAACGACATACATAACTTACATGTATGCGAATGCATTTATTTACTATTCAGAATCCTCGCGGGCTGTAGCTTCAGTGGCAGTATACCGAGGGAATTGGGAAGACTTTCTGAGTTATCCTTCTTGTAAGAATTTCTCAGCAACATCAACTTGTGATCGTTTTGGTGTTTCATCAACTCATTTAGTTCCATGTCAATTTCTTTGACAGGGCACTTAACTCAAATAATTTCACCGGTGAGATTCCACGAACTCTTGGCAATCTGTCAAAACTCTACTGGCTTGATCTAGCAGATAACCAGTTGACAGGACCGATTCCTGTTTCAACCTTCTCAAGTCCGGGGTTAGACCTTCTCAAAAAAGCAAAACACTTGTGAGTAAACTTTATATGTTCATATTACGTGCTGTTCTTAAGTTGGTATTTATACCTCTTAAGTTCTGACTTCTACGTTATGTCATTATCGCAGCCATTTTAACAAAAACCAACTTTCAGGCTCCATTCCGGACATTCTTTTTAGTTCTGACATGGTGCTAATTCATGTGTAAGTCAAGAAACTAAAGAGTGATTCGCGCAGACATGGTGCAAAACACTTTCCTTCTCACTTTGTGAACTTCTGATGTGGCAGACTGTTTGATGGAAATCAACTTAGCGGGAGCATTCCATTTACACTAGGACTTGTTCAGACACTTGAGGTTCTGTGAGTAAAATTGACCGTCTTATTTATCCTACCTTTCATGCTACTTCACCTTCAGTTTTAGATTATATGCTTGTACTCTTTTATCTTTTGCTTGTATTCATGTAACCTAACATATACAGTCGGCTCGATAGAAATGCCTTAAATGGTAGCGTCCCATCAAATCTTAACAATCTCACAAGCATTGTAGAGTTGTAAGTATACGTTTTTCCCATCGTAGCTCATTCAGTTGACTACTTGTAATTAAGAATTGCTAGACTCAGTAGTTCTTTGTGCTCTTATGTTCTGTTTTTAGGAATTTGGCTCACAACAAACTGTCCGGTCTACTACCAGATTTAACTGGAATGAATTCCCTTAATTATCTGTAAGGAAGATATCCAGAATCCTGATTTTTCCTAGTTGTTTCTCAATGTTGAAGTGATACATCATATTTTGTTTCTCTTCCAGGGACTTGAGCAATAATTCCTTCCATAAATCGGAGGCGCCTATATGGTTCTCGACTTTAGAGTCTCTCACCACTCTGTGAGTATTAATCAGTTATGAATGCAACTATGAATTTCCAAAAAAGTTTGATGAATCTAAGTTGGAAGAACTGATGTAATGCTCAGAGTCATTGAGTATGGCTCACTCCATGGATCAGTGCCTCAGAAACTTTTCGCTTTACCTCAATTACAACAAGTGTGAGTATCGCGATCCTAACTGAATAGTCCATGTGTATTACCTGCAATGAAGAGGTTGTAATGATCGTAATAACTTATGCAGGAAACTGAGGAACAACGCATTGAATGATACGTTGAACATGGGTGGCATCAGCGGCAGGCAACTCACACTGGTTGATTTACAGAACAACGAGATTTCCTCAATAACACTTGGCTCTGGATACAAAAATACCTTGATGTGAGATGGTTCATTTCTCTTTTTCGTCGATTAGATTATGTTTTTTGTCTCTTTCTTCTCCTTGATTGATTTGTCATTGTCCTCAGACTGATCGGAAACCCAGTGTGTGACACGGCCCTTGGAAACACGAACTACTGTCAGCTTCAGCAGCAATCTGCAAAGCCTTACTCAACCAGCCTAGCTAACTGTGGGAGAAAATCATGTCCTGCTGATCAAAAAGTTAGCCCACAAAGTTGTGATTGTGCTTATCCATATGAAGGAACATTTTACTTTAGAGGACCCTCTTTTAGGGAGTTGTCCAATGATAATACGTTCCATTCACTCGAAATGAGCTTGTGGGTGAAGTTGGATCTCACGCCCGGTTCAGTTTCTCTGCAGAACCCCTTCTTCAACATTGATGATTATCTTCAGGTGCAGTTGGAATTATTTCCACCAACAGGAAAGTATTTTAATAGATCAGAGGTTGAGCGGATTGGATTTTCTTTGAGTAACCAAACTTATAAGCCTCCTCACGAGTTTGGACCATACTATTTCATAGCATCTCCTTACACTTTCCAAGGTATAATTACTGAGTTTGTTTACAACTGTAACTTCTAGATCAAAATACTGACTTTAACTATAACTGTCTCAGCTGAACGCGGAGAAACTTCTATAAGCTCAAGACAGGTTATAGGAATAGCTACCGGGTGTACCATCCTGGTCCTCTTGCTCGTTGCTCTTGCAATATATGCTATTCAACAAAAGAAACTTGCTGAAAGAGCTATTGGACTGAGTAGACCATTTGGTAATGTAATCTATTACAGAAATATAAACCGATTGAGTTATAACTATATATACATTCAAGCCTCTATGATAACATTTCACTATAACGACCAAGTTTTCTTTGGAACTGATTTTCATATTGTGTTGAATTATATGATCTCTATAACAACATTTCGCTATAGCAGTCAAAGAAATATCAGAACAAACAACATCTTTATAGAGAGGTTCGACTGTATGTCCAGAATTCAACTAGGATTGAACTAAAATGTCTGATTTCTTTGACCTTCTTTGTCCAGCATCGTGGGCTCCAAGTGGCAACGACAGTGAAGGTGCACCACAACTTAAGGGAGCCAGATGGTTTTCTTATGACGAACTTAAGAAATACACAGGAAACTTCTCGGAGAGAAATGAGATTGGTTCTGGTGGCTACGGGAAGGTTTGCTACCAACATCCACAGTAAATACAGAATAAAGGGATAAACTCTTAGTTACTTTGCTTATTCACGTCTGTTCTGTTTCCTAGGTCTACAGAGGAATGCTCGCGAATGGGCAAGTAATTGCTATCAAAAGGGCTCAACATGGATCCATGCAAGGTGGACAAGAGTTCAAGACGGAAATTGAATTGCTTTCACGGGTTCATCACAAGAACCTAGTTGGTCTGGTTGGATTCTGTTTTGAGCAAGGCGAACAAGTACTGGTATATGAGTATATGCCAAATGGTTCACTCAGGGAGAATTTGTCAGGTAAGTTACATCCTCCTATACATTAAAGACTACTTCCTGTTTACAGTAATTTACACTAAAAAGTTCCTAACATTTCCATTTCGCTTTAGAAGTTAATTTCCACTATGCTCTACAGGGAAAACGAGCATTTATCTAGATTGGAAGAGGAGACTTCGTGTAGCGCTTGGTTCAGCTAGAGGATTAGCTTATCTGCATGAGCTTGCCAATCCTCCTATAATTCATAGAGATGTGAAGTCGACTAATATTTTGTTGGATCAGAACTTAACAGCAAAGGTCGGGGATTTTGGTTTGTCCAAACTCGTATCAGACAGCTCAAAGGGTCATGTTTCCACTCAAGTTAAAGGCACATTGGTCAGTACCACATCCTGCACATTTTCGCTTTCCATTTCAAGAAAAACATTGAATTTAAGACCTATTGATTACATTGCAGGGTTATCTAGATCCTGAATACTATATGACTCAACAACTAACCGAGAAGAGCGATGTGTATAGCTTTGGTGTTGTAATGCTTGAACTCATAACTGCAAAACAACCAATAGAGAAGGGGAAATACGTTGTTCGAGAGATGAGAACAGCAATTCATAAGAACGACGAGGAGCATTATGGCTTGACTAATATGATCGATCCAGTCATTAGAAACATGCCAAATCTAATTGGTTTTACAAGGTTTGTGGACGTGGCGATGCAATGTGTTGAGGAGGCTGCTGCTGACCGTCCAACGATGAGTGAAGTGGTAAAAATGCTTGAAAGTATTCTTCAAAATGATGGTCTGGAAACAAATTCTACGTCTGCATCATCATCGATAACGGATTTTGGGACAGCAATAGCTGCTTCTAGACATCCTTATAATAAAGAGGCTCTACAGAGAAAAGAGATGAATGATACTCATGCTTTTGATTACAGTGGTGGATACACTCTTCCAACAAATGTGGAACCAAAATAG

Download sequence region

Download sequence (5.4Kb)

Get flanking sequences on SL2.50ch10

mRNA Solyc10g085670.1.1

Ontology terms

terms associated with this mRNA

GO:0004675 – transmembrane receptor protein serine/threonine kinase activity

cDNA sequence

spliced cDNA sequence, including UTRs

>Solyc10g085670.1.1 Receptor like kinase, RLK
ATGGCAGCTACCCGGCTGTTGCTCTGCTTTATCGTCTTCTCGTCTGGCATCGATTTCATATACACTGTTACAGATCCTAGAGATGTAACGATACTTCGATCACTGAAAGATCAGTGGGAAAATACGCCGCCTAGTTGGCAGAAATCGGATGATCCTTGTGGAACATCATGGGAAGGTGTAACTTGCAACAACTCAAGGGTAACTGCATTGGGATTATCAACGATGGGACTGAGAGGAAAATTAAGTGGTGACATTGGAGGGCTCACTGAATTAATTTCCTTAGACCTGTCGTTCAACCGAGGACTTACAGGTTCCCTGTCTCCGCGGATTGGAGATCTGCAGAAACTAAACATATTAATCCTCGCGGGCTGTAGCTTCAGTGGCAGTATACCGAGGGAATTGGGAAGACTTTCTGAGTTATCCTTCTTGGCACTTAACTCAAATAATTTCACCGGTGAGATTCCACGAACTCTTGGCAATCTGTCAAAACTCTACTGGCTTGATCTAGCAGATAACCAGTTGACAGGACCGATTCCTGTTTCAACCTTCTCAAGTCCGGGGTTAGACCTTCTCAAAAAAGCAAAACACTTCCATTTTAACAAAAACCAACTTTCAGGCTCCATTCCGGACATTCTTTTTAGTTCTGACATGGTGCTAATTCATGTACTGTTTGATGGAAATCAACTTAGCGGGAGCATTCCATTTACACTAGGACTTGTTCAGACACTTGAGGTTCTTCGGCTCGATAGAAATGCCTTAAATGGTAGCGTCCCATCAAATCTTAACAATCTCACAAGCATTGTAGAGTTGAATTTGGCTCACAACAAACTGTCCGGTCTACTACCAGATTTAACTGGAATGAATTCCCTTAATTATCTGGACTTGAGCAATAATTCCTTCCATAAATCGGAGGCGCCTATATGGTTCTCGACTTTAGAGTCTCTCACCACTCTAGTCATTGAGTATGGCTCACTCCATGGATCAGTGCCTCAGAAACTTTTCGCTTTACCTCAATTACAACAAGTGAAACTGAGGAACAACGCATTGAATGATACGTTGAACATGGGTGGCATCAGCGGCAGGCAACTCACACTGGTTGATTTACAGAACAACGAGATTTCCTCAATAACACTTGGCTCTGGATACAAAAATACCTTGATACTGATCGGAAACCCAGTGTGTGACACGGCCCTTGGAAACACGAACTACTGTCAGCTTCAGCAGCAATCTGCAAAGCCTTACTCAACCAGCCTAGCTAACTGTGGGAGAAAATCATGTCCTGCTGATCAAAAAGTTAGCCCACAAAGTTGTGATTGTGCTTATCCATATGAAGGAACATTTTACTTTAGAGGACCCTCTTTTAGGGAGTTGTCCAATGATAATACGTTCCATTCACTCGAAATGAGCTTGTGGGTGAAGTTGGATCTCACGCCCGGTTCAGTTTCTCTGCAGAACCCCTTCTTCAACATTGATGATTATCTTCAGGTGCAGTTGGAATTATTTCCACCAACAGGAAAGTATTTTAATAGATCAGAGGTTGAGCGGATTGGATTTTCTTTGAGTAACCAAACTTATAAGCCTCCTCACGAGTTTGGACCATACTATTTCATAGCATCTCCTTACACTTTCCAAGCTGAACGCGGAGAAACTTCTATAAGCTCAAGACAGGTTATAGGAATAGCTACCGGGTGTACCATCCTGGTCCTCTTGCTCGTTGCTCTTGCAATATATGCTATTCAACAAAAGAAACTTGCTGAAAGAGCTATTGGACTGAGTAGACCATTTGCATCGTGGGCTCCAAGTGGCAACGACAGTGAAGGTGCACCACAACTTAAGGGAGCCAGATGGTTTTCTTATGACGAACTTAAGAAATACACAGGAAACTTCTCGGAGAGAAATGAGATTGGTTCTGGTGGCTACGGGAAGGTCTACAGAGGAATGCTCGCGAATGGGCAAGTAATTGCTATCAAAAGGGCTCAACATGGATCCATGCAAGGTGGACAAGAGTTCAAGACGGAAATTGAATTGCTTTCACGGGTTCATCACAAGAACCTAGTTGGTCTGGTTGGATTCTGTTTTGAGCAAGGCGAACAAGTACTGGTATATGAGTATATGCCAAATGGTTCACTCAGGGAGAATTTGTCAGGGAAAACGAGCATTTATCTAGATTGGAAGAGGAGACTTCGTGTAGCGCTTGGTTCAGCTAGAGGATTAGCTTATCTGCATGAGCTTGCCAATCCTCCTATAATTCATAGAGATGTGAAGTCGACTAATATTTTGTTGGATCAGAACTTAACAGCAAAGGTCGGGGATTTTGGTTTGTCCAAACTCGTATCAGACAGCTCAAAGGGTCATGTTTCCACTCAAGTTAAAGGCACATTGGGTTATCTAGATCCTGAATACTATATGACTCAACAACTAACCGAGAAGAGCGATGTGTATAGCTTTGGTGTTGTAATGCTTGAACTCATAACTGCAAAACAACCAATAGAGAAGGGGAAATACGTTGTTCGAGAGATGAGAACAGCAATTCATAAGAACGACGAGGAGCATTATGGCTTGACTAATATGATCGATCCAGTCATTAGAAACATGCCAAATCTAATTGGTTTTACAAGGTTTGTGGACGTGGCGATGCAATGTGTTGAGGAGGCTGCTGCTGACCGTCCAACGATGAGTGAAGTGGTAAAAATGCTTGAAAGTATTCTTCAAAATGATGGTCTGGAAACAAATTCTACGTCTGCATCATCATCGATAACGGATTTTGGGACAGCAATAGCTGCTTCTAGACATCCTTATAATAAAGAGGCTCTACAGAGAAAAGAGATGAATGATACTCATGCTTTTGATTACAGTGGTGGATACACTCTTCCAACAAATGTGGAACCAAAATAG

Download sequence (2.9Kb)

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc10g085670.1.1	SL2.50ch10:64774340..64779799	965	-	n/a

Add items to a list:

Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc10g085670.1	SL2.50ch10:64774341..64779799	5,459	-	n/a

Add items to a list:

Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc10g085670.1.1.1	SL2.50ch10:64779715..64779799	85	-	n/a
exon	exon:Solyc10g085670.1.1.10	SL2.50ch10:64777321..64777389	69	-	1
exon	exon:Solyc10g085670.1.1.11	SL2.50ch10:64777163..64777237	75	-	1
exon	exon:Solyc10g085670.1.1.12	SL2.50ch10:64777005..64777076	72	-	1
exon	exon:Solyc10g085670.1.1.13	SL2.50ch10:64776788..64776922	135	-	1
exon	exon:Solyc10g085670.1.1.14	SL2.50ch10:64776229..64776701	473	-	1
exon	exon:Solyc10g085670.1.1.15	SL2.50ch10:64776004..64776156	153	-	2
exon	exon:Solyc10g085670.1.1.16	SL2.50ch10:64775590..64775729	140	-	2
exon	exon:Solyc10g085670.1.1.17	SL2.50ch10:64775284..64775503	220	-	n/a
exon	exon:Solyc10g085670.1.1.18	SL2.50ch10:64774933..64775168	236	-	2
exon	exon:Solyc10g085670.1.1.19	SL2.50ch10:64774341..64774853	513	-	n/a
exon	exon:Solyc10g085670.1.1.2	SL2.50ch10:64779424..64779547	124	-	2
exon	exon:Solyc10g085670.1.1.3	SL2.50ch10:64778679..64778750	72	-	1
exon	exon:Solyc10g085670.1.1.4	SL2.50ch10:64778501..64778575	75	-	1
exon	exon:Solyc10g085670.1.1.5	SL2.50ch10:64778252..64778323	72	-	1
exon	exon:Solyc10g085670.1.1.6	SL2.50ch10:64778007..64778168	162	-	1
exon	exon:Solyc10g085670.1.1.7	SL2.50ch10:64777838..64777912	75	-	1
exon	exon:Solyc10g085670.1.1.8	SL2.50ch10:64777682..64777753	72	-	1
exon	exon:Solyc10g085670.1.1.9	SL2.50ch10:64777491..64777562	72	-	1
intron	intron:Solyc10g085670.1.1.10	SL2.50ch10:64777390..64777490	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.11	SL2.50ch10:64777238..64777320	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.12	SL2.50ch10:64777077..64777162	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.13	SL2.50ch10:64776923..64777004	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.14	SL2.50ch10:64776702..64776787	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.15	SL2.50ch10:64776157..64776228	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.16	SL2.50ch10:64775730..64776003	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.17	SL2.50ch10:64775504..64775589	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.18	SL2.50ch10:64775169..64775283	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.19	SL2.50ch10:64774854..64774932	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.2	SL2.50ch10:64779548..64779714	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.3	SL2.50ch10:64778751..64779423	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.4	SL2.50ch10:64778576..64778678	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.5	SL2.50ch10:64778324..64778500	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.6	SL2.50ch10:64778169..64778251	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.7	SL2.50ch10:64777913..64778006	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.8	SL2.50ch10:64777754..64777837	n/a	-	n/a
intron	intron:Solyc10g085670.1.1.9	SL2.50ch10:64777563..64777681	n/a	-	n/a

Add items to a list:

Related views

Genetic loci

Tomato locus SlMAPKKK79 (MAP kinase kinase kinase 79)

http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17965587%2Fdetails feature 17965587

User comments

Please wait, checking for comments. (If comments do not show up, access them here)

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: