Solanum lycopersicum mRNA Solyc10g085830.1.1
mRNA details
|
| Name | Type | Organism | |
|
Synonyms / aliases
mRNA:Solyc10g085830.1.1
|
Length
1,086
|
|
Description
O-methyltransferase 1 (AHRD V1 ***- D7MTQ7_ARALY); contains Interpro domain(s) IPR016461 O-methyltransferase, COMT, eukaryota
|
|
Location(s)
SL2.50ch10:64899145..64901524
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0008171
- Length
- 2380
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc10g085830.1.1 O-methyltransferase 1 (AHRD V1 ***- D7MTQ7_ARALY); contains Interpro domain(s) IPR016461 O-methyltransferase, COMT, eukaryota
ATGGAGAATGCAAATGGGGAACCAAGCAACAACAATAATAATGATGAAAGATTAGCTATAATGGAATTAGCTAACATGATAAGTGTACCTATGTCCCTTAATGCTGTTGTTAAACTTAAGGTAACTGATGCTGTTTGGGAAAATGGATCAAATGCTCCACTCTCTCCTGTTGAAATTCTGGCTAAAATCCGCGGCCCTCAGGGCGGCGGGGATGCTGAGAACCTTCAACGAATTTTACGTATGCTCACGAGCTATGGTGTGTTCAAGGAACATGTTGATGACGGCTCTCAAAGAAGATATTCATTGACTAAGGTGGGGAAAACCCTAGTGACGGACGAGAATGGCTTATCTCATGGTTCGTACGTGCTCCAGCACCATCAGGACGCGTTAATGAAGGCGTGGACGATGGTTCATGAGGCGGTTAATGATTCATCGATAGAGCCATTTGCGAAGGCAAATGGTGAGCCAGCTTATAGTTACTATGGAAAAAACTCAGAGATGAATAGCCTTATGTTAAATGCAATGTCTGGAGTTTCTGTGCCATTTATGAAGGCAATTTTACAAGGATATGATGGGTTTCAAGGTGTGAAAACACTTGTTGATGTTGGAGGAAGTGGTGGAGATTGCTTGAAAATGATTTTAGAAAAACATACAGATATTGAACTTGGAATCAACTTTGATTTGCCTGAGGTGGTTGAAAAAGCCCCACAAATTCCTAGTATAAAGCACGTTGGTGGTGACATGTTTGATTATATACCAAAGGGGGATGCTATTTTCATGAAGTGGGTGCTAACAACATGGACAGATGATGAATGTAAAGAAATAATGAAGAGTTGTTACAATGCACTTCCAGAGAAAGGCAAATTTATTGCTTGTGAGCCAGTTTTGCCTCATCATACTGATGATAGCAAGAGAACAAGAGCACTTCTTGAAGGTGATATTTTTGTCATGACTATTTACCGTGCCAAGGGCAAGCACCGTACTGAGGAAGAATACCGGCAGCTCGGTCGAGCTGCCGGTTTCAACGAGTGCAAGGGTTTCTATATCGATCATTTTTTTACGATTCTTGAATTTCACAAGTCATGA
ATGGAGAATGCAAATGGGGAACCAAGCAACAACAATAATAATGATGAAAGATTAGCTATAATGGAATTAGCTAACATGATAAGTGTACCTATGTCCCTTAATGCTGTTGTTAAACTTAAGGTAACTGATGCTGTTTGGGAAAATGGATCAAATGCTCCACTCTCTCCTGTTGAAATTCTGGCTAAAATCCGCGGCCCTCAGGGCGGCGGGGATGCTGAGAACCTTCAACGAATTTTACGTATGCTCACGAGCTATGGTGTGTTCAAGGAACATGTTGATGACGGCTCTCAAAGAAGATATTCATTGACTAAGGTGGGGAAAACCCTAGTGACGGACGAGAATGGCTTATCTCATGGTTCGTACGTGCTCCAGCACCATCAGGACGCGTTAATGAAGGCGTGGACGATGGTTCATGAGGCGGTTAATGATTCATCGATAGAGCCATTTGCGAAGGCAAATGGTGAGCCAGCTTATAGTTACTATGGAAAAAACTCAGAGATGAATAGCCTTATGTTAAATGCAATGTCTGGAGTTTCTGTGCCATTTATGAAGGCAATTTTACAAGGATATGATGGGTTTCAAGGTGTGAAAACACTTGTTGATGTTGGAGGAAGTGGTGGAGATTGCTTGAAAATGATTTTAGAAAAACATACAGATATTGAACTTGGAATCAACTTTGATTTGCCTGAGGTGGTTGAAAAAGCCCCACAAATTCCTAGTATAAAGCACGTTGGTGGTGACATGTTTGATTATATACCAAAGGGGGATGCTATTTTCATGAAGTGGGTGCTAACAACATGGACAGATGATGAATGTAAAGAAATAATGAAGAGTTGTTACAATGCACTTCCAGAGAAAGGCAAATTTATTGCTTGTGAGCCAGTTTTGCCTCATCATACTGATGATAGCAAGAGAACAAGAGCACTTCTTGAAGGTGATATTTTTGTCATGACTATTTACCGTGCCAAGGGCAAGCACCGTACTGAGGAAGAATACCGGCAGCTCGGTCGAGCTGCCGGTTTCAACGAGTGCAAGGGTTTCTATATCGATCATTTTTTTACGATTCTTGAATTTCACAAGTCATGA
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc10g085830.1.1 | SL2.50ch10:64899144..64901524 | 362 | + | n/a |
Add items to a list:
| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc10g085830.1 | SL2.50ch10:64899145..64901524 | 2,380 | + | n/a |
Add items to a list:
| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc10g085830.1.1.1 | SL2.50ch10:64899145..64899440 | 296 | + | n/a |
| exon | exon:Solyc10g085830.1.1.2 | SL2.50ch10:64899950..64900371 | 422 | + | 1 |
| exon | exon:Solyc10g085830.1.1.3 | SL2.50ch10:64900608..64900672 | 65 | + | 2 |
| exon | exon:Solyc10g085830.1.1.4 | SL2.50ch10:64901222..64901524 | 303 | + | n/a |
| intron | intron:Solyc10g085830.1.1.1 | SL2.50ch10:64899441..64899949 | n/a | + | n/a |
| intron | intron:Solyc10g085830.1.1.2 | SL2.50ch10:64900372..64900607 | n/a | + | n/a |
| intron | intron:Solyc10g085830.1.1.3 | SL2.50ch10:64900673..64901221 | n/a | + | n/a |
Add items to a list:
| Related views |
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
mRNA details
mRNA details

