Sol Genomics Network

Solanum lycopersicum gene Solyc10g085990.1

Name Solyc10g085990.1	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc10g085990	Length 4,456

Description

Receptor protein kinase-like protein (AHRD V1 ***- Q9LJU5_ARATH); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

Location(s)

SL2.50ch10:64979123..64983578

GFF source

ITAG_eugene

From BOGAS: 1

Length: 4456

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc10g085990.1.1	SL2.50ch10:64979123..64983578	1,116	-	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc10g085990.1 SL2.50ch10:64983578..64979123 (sequence from reverse strand)
ATGGGTTGGTTTCCTTGTTCTGGACCATCCAAACAGACCTCAAAGAAGAAAAATTCAGTCGATTCGGGCCGGCACTCTACTGGTATTTATCAATCTGCACAAGTTGTGATTTTTGTGTATATAATCAACTGATTGTTTGATTTGGTGAAATGGGGTTGCTTTATGTTTGTTTAATTTTTGGATGTTTTGGTTATTTTGGGTTTTTACTTCTGATTCTTGGATATTTATGCTGTAAAGTTGTAATCTTTGTGTATATAGTCAATTGATTGTTTGATTTGGTGAAATGGGGTTGCTTTATGTTTGTTTAATTATTGTTGGGGTTTGGTTGTTTTGGGTTTTTACTTGTGATTCTTGGATATTCAAGTTGTGAATTTGTAATTTTTGTGTATATGGTCAACTGATTGTTTGATTTGGTGAAATGGGGCTGCTTTATGTTTGTTTAATTTTTGTTGGGTTTTTTTTACTTCTTTTTTTTTGTTATTCAAACTGTGAAGTTGTACTTTTTTGTGTATATGGTCAACTGATTGTTTGATTTGGTGAAATGGGATTGCTTTATGTTTGTTTAGTTTTTGTGTGTTTTGCGTTTTTAGTTCTGATTCTTGGATATTTAAGCTGTAAAATTATAATCTTTGTGTATATAGTCAACTGATTGTTTAATTCGGTGAAATGGGGTTGCTTTATTTTTGTTTAATTTTTGTTTGTTTTGTTTGTTTTGGGTTTTTACTTCTGATTCTTGGATATTTAAGCTTAAAAGTTGTAATATTGTGTATATAGTCAACTGATTGTTTGATTTGGTGAAATGGGGTTGCTCTATATTTGTCTAGTTTTTGTGGGGTTTGGTTGTTTTGGGTTTTTACTTCTGATTCTTGGATACTCAAGCTGAAAGTTGAAATCTTTGTGTATATAATCAACTGATTGTTTGATTTGCTGAAATGGGGTTGCTGCATGTGTGTTTAATTTTTGTGTGTTTTGGTTATTTTGGGTTTTTACTTCTGATTCTTGGATATTCAAGTTGTAAAATTGTAATCTTTGTTTATAAAGTCAACTGAATGTTTGATTTGCTGAAATGGGATTGCGTTATGTTTGTCCAATTTTTGTGGGTTTTGGTTGTTTTGGGTTTTTTACTTCTGATTCTTGGATATTCAGCTGTTTACCATCAGGGGTACTTTGATCTGGATCTTGATATCATAATCAGTGACTTGAAATTTAAATGTTATGCTACTTGATTGTTGTGGTAGTATGTTATGGAAGTGCTGGATGACCTGCTCCCTCTGGTTAATTTAGTCTAGGTTGTAGTTGGATCCAAGGGGGTGAAGCTGGGATGAGAAAATGAAATGTTGGATGATCTTTTCCTATCTGACTATGCCTTGGTGGAAAGTATCATTGACAATATCGTCTAGTGGACAAAATAAGAAAAGGACAAAAACACTTTGACCTCCAAAGATTTGCAGCTTCTCCATTTCACAATATATAGATTTTGGAGTTTTAACTTTTTTATCTCAGCATATCATATCACATAACTAGTTATCTGCCTATCAGGTAAAAATGTGAATTGTGCATTACTAAATTTTGAAGAACACATGGTTGTCATAGATATATTATTGGTACCATTATTCTAAGCTCGTCAATTGTTGCTGTGTTTGGTAGCATATGCCATATTATGCCATATCGAAATTTCTAACGTAACCAACATCAACTAGTGAAGTTTCATAGTTCGAATTTTAAGCAATCTTTTATAGTTAATGACGCTTCATAGTTCAAACTTCAAACAACCTCCCCCATCCCTAAGTTGAACCAACAAAAAAGTTTAGATGTCATTTTCCCCTCTTGTCAATCATCCTTCTTATTTCTGAACACTCGTTGCCTCACTTCAATGTCATGCTTTTGCTTACTTTTCTATTTTATTTTCTTGTTTTAGATAAGTTGAAATCAAAGAATTCATTACGCTCAAAGGAAGTTGATAAGGATGCAGGGTCCAACCAAATTGCAGCCAAGACTTTTATATTTCGTGATTTAGCAGCTGCAACAAAAAATTTCCGAGGTGATTATCTTCTTGGAGAAGGAGGCTTTGGTAGAGTTTACAAAGGGGTGATCGAGTCCAATCAGGTCAATTCTCATCAAGTCTTTTTTGCTTTTGGCTAATAATGGAACGTAAAAAAGAAATCAATAGTTTGGTTTGCCTCTAATGTACGAGATTCTGTTGCACTTCCTACTGAGCTGTTCTGTAAATCTTCGGAGTATTTTACTGATTTTTTTTCTTGATTCTTACTGAGCCACGGCCACAGACTTTTATCCCTTTCAGATGAGCATAGCTATGTTATTTTCAGTTGGCTCATTTGCAGAGGGTCAACACTTGGGACTTCTTTCCAGTCTGTCAATTGGCAAAAGGTGGAACACTGGGTCACTTGAGTTTTTAGTTACATGAGAAATCTGAAACGTAAATTTCACTTTTGTTCTTTAGCATCTGCAAAGTGAGACTAGGCCTTACTCAAATAAGGAAAATGCTTTTCTTCTTTCTAACAAGTGGTGATGTACATTTCATGGATACTTTGGTTTCTATTAGGGTTTTTATCATATTCGTTGAGCTAATTGGGCTCAATTCCCTTTGCTCACATATATGTGAGGTTCGAGTTGAAATAGGCAAAGGTATAACTGACAAAGTCATTTACATTTTCTTCTAGTGTTGCCACCATGCTTGATGGTTTGCTTCTCACGTCTAAGTTGTTAGCTGGAGCTGAAGTTTAACACCTTTTGTTGACTTTTAATGGTGCAGGTCGTCGCCATCAAGCAACTAGATCGTAATGGATTGCAGGGCAACAGGGAATTTCTTGTCGAAGTGCTGATGTTAAGTCTGTTACACCATCCTAACCTTGTAAATCTAATTGGCTATTGTGCTGATGGAGATCAGAGACTTCTGGTCTACGAATATATGCCATTAGGATCATTGGAGGACCATCTTCATGGTAATATTTCTTAGGTAGAATTTCCTTTTCATTTTATTTGAAGTCGGATTAAATTTGGAATTGAAGTATTGCTCTGCAGATCCTACGCCAGGTAAGGAACGGCTAGATTGGAACACAAGAATGAAAATTGCTGCCGGAGCAGCAAAAGGATTGGAATATTTACACAGTGCAAGTCCCCCTGTAATATATCGTGATTTGAAATGCTCCAACATTTTGCTTGGTGAGGGTTATCATGCGAAGCTCTCTGACTTCGGGTTGGCCAAATTGGGGCCTGTAGGGGATAACACCCATGTTTCTACAAGAGTTATGGGTACTTATGGGTACTGTGCACCAGAGTATGCCATGACAGGACAATTGACTTTGAAGTCAGATGTTTACAGCTTTGGGGTAGTCCTCCTGGAGATTATTACAGGCAGGAAAGCAATTGAAAGTTCAAAAACTGGAGGAGATTTCAATCTGGTTATATGGGTATGATTTCCTTATCATACAGCTTTTTGGCAACTCTTTTTTCGGCGGTGGATTTTTGTTTCATTGATGTATTATGATCTCTATAGGTATAGTTGTTCAACTATAGAAGGGAAAGAAGTATTATCGGACAGTTACAAAATGTCTCTACAGTATCTGCAAAATCCATAAGATGAGTTCAATGAATGAGTTAAAAAACTGGTTATTTGCTGATTTAATACGGTTTGAAAATTTTAGTGCACTATCTGGAAGAAAATGTGTTTAAGTGACTTTAGGATCCTTTGTGGAAGATCTAGAGTACTTTTTTACCTGAATGAAATAACAAATGTACTATCATTCTTAAGGCTGGGTGAACCAGTTGATGTTGACGTGCTGCTCAATGGAACGGTGTCAGTTGACACCACTTGAAGCAATGTATCTTCACCATGGGGATAGGGGCAAGGTTGGGTATTTCAGTTGATGTAGACGTGCGTGCTGTTAATCTCCATTTAAAGCTGGAAGGTAGTGGAACATTCAGTGTCGGAAGTCTAGAATTTCTTTCAAGTTCTCGTATATGTGATGTTTAAGGAAAATCTTGATCCTCTATTGTGCGTCAAATGGAGCAGAGGAGAGATTTATAGAGTTTAGGTCCTCTTTGGTTACATGGGGCATTATATGTGTGGAGGGCGGGGGTGATGTAGAATCTGTAGATTGTTCTTTTCTGTTTGGCAGCCATAAAGAGAACCAAGTTTCTAATTATATAGTTGTGCTCTGTATATCAGGCAAGACCATTGTTCAAAGATCGGAGGAAGTTCTCACAGATGGCTGATCCAATGCTACAAGGCCATTATCCAGTAAGAGGCATGTACCAAGCTCTAGCAGTTGCAGCAATGTGTGTTCAGGAGCAACCTAACATGCGTCCAGTCATAGCAGACGTTGTCACGGCTTTGACTTACCTTGCTTCACAAAAGTTTGACCATGAAACCCGAGGGGGCATCCAAACTTCACGGCCAGGACCTGCTACTTCACCTAGAATGAAACGATGGTGA

Download sequence region

Download sequence (4.4Kb)

Get flanking sequences on SL2.50ch10

mRNA Solyc10g085990.1.1

Ontology terms

terms associated with this mRNA

GO:0006468 – protein phosphorylation

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc10g085990.1.1	SL2.50ch10:64979122..64983578	372	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc10g085990.1	SL2.50ch10:64979123..64983578	4,456	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc10g085990.1.1.1	SL2.50ch10:64983497..64983578	82	-	n/a
exon	exon:Solyc10g085990.1.1.2	SL2.50ch10:64981473..64981660	188	-	2
exon	exon:Solyc10g085990.1.1.3	SL2.50ch10:64980616..64980805	190	-	n/a
exon	exon:Solyc10g085990.1.1.4	SL2.50ch10:64980148..64980536	389	-	2
exon	exon:Solyc10g085990.1.1.5	SL2.50ch10:64979123..64979389	267	-	n/a
intron	intron:Solyc10g085990.1.1.2	SL2.50ch10:64981661..64983496	n/a	-	n/a
intron	intron:Solyc10g085990.1.1.3	SL2.50ch10:64980806..64981472	n/a	-	n/a
intron	intron:Solyc10g085990.1.1.4	SL2.50ch10:64980537..64980615	n/a	-	n/a
intron	intron:Solyc10g085990.1.1.5	SL2.50ch10:64979390..64980147	n/a	-	n/a

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Related views

Genetic loci

Tomato locus Solyc10g085990

http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17965917%2Fdetails feature 17965917

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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