Solanum lycopersicum mRNA Solyc11g056650.1.1

mRNA details  
Name
Solyc11g056650.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc11g056650.1.1
Length
1,326
  
Description
BHLH transcription factor (AHRD V1 *-*- B6TXR4_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH
Location(s)
SL2.50ch11:47291409..47293946
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2538
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc11g056650.1.1 BHLH transcription factor (AHRD V1 *-*- B6TXR4_MAIZE); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH

ATGGATCATAGTCGTGTTGAGCAGCAACCAATTACTTCTGGTTTAACTAGGTATCGATCTGCGCCAAGTTCTTATTTCTCTACTCTGTTAACTACTACTACACCTGTTACTGGTGGGGGTTGTGGTTATGCAAGAGATGATTTTTCCAATTTACCAAATTCTACTGCTTCTTCTTCATCTACTGATATAGAGCAAGTTTTTGCTAGATTTGTAGCTAGTATTGGTAACTCCAACTCTAACTCTGGGAATTTTCCTACAAATCAACCAATTCATGAAAACCCCACGAGTAATATGAATGTTAGATCGGATTTTGTTGTACCAAAACAAGAGATTACACCGCGGTTAGTACGACATAGAAGTAGTGATCACTCTCTTGTTTCAAATTATCAAAATCAGAATCAACACTTCATTTCACCTGTGAAAAGGGAACCAGAAACTCTGCTACAGAGTACTGATCATGTTTCAGCTTCACAACTGAATTACCAAAGCCAACCTCAACAAATTGAGAAGTTAAATGCAGTTACAGATAAGCCATTTGTATTCGCGAATTCGGCTAGTTTGACACCTGGTAGTAGTAGTGGTGGTGGTGGTAATTCGAATCTTACCCGTTATAATAGTTCGCCTGCTGGATTCTTTGCTCAAATCAATATTGAAAATGAATATGGTGCTATACGAGGCATAGGGCGTTACGAAACTGGTACTAATGCTGCTGCAGATACTTCATTGTCGACTCCAAAAAGTTTCAAGACTCAAGTTGGATTCTCATCCGGGAAACCTCCTGCTTCTCCCAGGCTTATGGCTCCAATATCTGAATTTGGAACTAAAGTCTTAGAGGAAAAGAGCATGGGGAATGAACATAAAAACGACGAGCATTGCATTACAGATTTCCCCATGCCTTCTTGGGAAGATTCACACATTTTGTCCGATGATTTCCTTAAAACTGAAGACATTGAGATTGAGCCATTCTCTAATGAAGATGCATCCCATAATCAGAGTAGTGAAGGGCTGGCTCGCCCGCCAATTCCTTTATCTCATCATTTGAGTTTGCCCACAAGTACCATGGAGAAGCTCTTGCAAGATTCAGTTCACTTGAATGTCAGGGCAAAGAGGGGTTGTGCCACTCACCCTCGTAGCATTGCAGAAAGGGTAAGAAGAACACGAATAAGCGACAGAATGAGGAAGCTGCAAGAGCTTGTTCCCAACATGGACAAGCAAACAAACACAGCAGATATGTTGGATTTTGCAGTAGATTACATTAAAGAGCTGGAGAAACAAGTCAAGATACTAGCAGAAAGGCGCGCCAAATGTACGTGCATAAATAAGTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc11g056650.1.1SL2.50ch11:47291408..47293946442-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc11g056650.1SL2.50ch11:47291409..472939462,538-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc11g056650.1.1.1SL2.50ch11:47293289..47293946658-n/a
exonexon:Solyc11g056650.1.1.2SL2.50ch11:47292357..47292691335-2
exonexon:Solyc11g056650.1.1.3SL2.50ch11:47292131..47292283153-n/a
exonexon:Solyc11g056650.1.1.4SL2.50ch11:47291703..4729176866-n/a
exonexon:Solyc11g056650.1.1.5SL2.50ch11:47291547..4729161569-n/a
exonexon:Solyc11g056650.1.1.6SL2.50ch11:47291409..4729145345-n/a
intronintron:Solyc11g056650.1.1.2SL2.50ch11:47292692..47293288n/a-n/a
intronintron:Solyc11g056650.1.1.3SL2.50ch11:47292284..47292356n/a-n/a
intronintron:Solyc11g056650.1.1.4SL2.50ch11:47291769..47292130n/a-n/a
intronintron:Solyc11g056650.1.1.5SL2.50ch11:47291616..47291702n/a-n/a
intronintron:Solyc11g056650.1.1.6SL2.50ch11:47291454..47291546n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17982083%2Fdetails feature 17982083
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