Solanum lycopersicum mRNA Solyc11g068930.1.1

mRNA details  
Name
Solyc11g068930.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc11g068930.1.1
Length
2,148
  
Description
Autophagy-related 7 (AHRD V1 ***- B8XVQ4_MAIZE); contains Interpro domain(s) IPR006285 E1-like protein-activating enzyme Gsa7p/Apg7p
Location(s)
SL2.50ch11:53486488..53491275
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008152
  • GO:0005737
  • GO:0003824
Length
4788
Nb exon
14
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc11g068930.1.1 Autophagy-related 7 (AHRD V1 ***- B8XVQ4_MAIZE); contains Interpro domain(s) IPR006285 E1-like protein-activating enzyme Gsa7p/Apg7p

ATGGCGGATACTGGAAAAGGAACAATTCTTCAATTTGCACCTTTTCAGAGTTTTGTAGATGAAGGGTTTTGGCATAAATTATCTTCTTTCAAGCTTAATAAATTGCGTCTTGATGAATCCCCAATTCCAATTACTGGCTTTTATGCACCTTGCTCGCATCCTCAAGTATCAAATCACTTGACTCTCCTGGCTGAATCTTTGCCTGCTGATTCCGATGAAGAATCATCGTCTCTTCTAGCTAGTCAGGGGAATAGAAATAGGTGTCCTGTTCCTGGCATTCTTCTCAACACAAACACGTTAGAAAGTTTCTATGCGCTTGATAAGCAGAGCCTACTTAAGGCAGAAGCCAAGAAGATATGGGATGACATTTACTCAGGCAAAGTTGAGGAGGACAGTTCTGTGCTCTTAAGATTCCTAGTTATATCATTTGCAGACTTGAAAAAGTGGAGCTTTCATTATTGGTTTGCGTTCCCTGCTTTGGTGCTTGATCCTCCTGCAACTCTAGTTAATTTGAAACCAGCTTCCCAGTGCTTCACTTCTGTAGAGGCTGAATCTGTGTCTAGTGCTTGTAATGAGTGGCGTAGCAAGAGCTCCACAGCAGATATACCATTCTTTTTGGTGTCTATTGGTTCAAATTCAGTTGCTACTCTCAGGCATCTAAGGGAGTGGGAAACCTGCCAAAATAATGGTCAAAAGATTCTTTTTGGTTTTTATGACCCTTGTCATCTTCCACATAATCCTGGATGGCCACTTCGCAATTATCTTGCCTATTTCTGCTCAAGGTGGGGCCTTGGAAAGATTCACTTTTTCTGCTACCGCGAAAACCGTGGTTTTGCAGATCTTGGATTGTCCCTTGTTGGAGAAGCTGAAATATCTCTTTCACAAGGAGGGAGGAATCATCAGAACATGCCCAATGTTGTGGGATGGGAACTAAATAAAGGGAAGAAGGGTTTGAGATGCATCAGCCTCGCTAAAACTATGGATCCGACGAGGTTAGCTGTATCAGCTGCTGATTTGAACTTGAAACTAATGAGGTGGCGGACATTGCCGTCATTGAATCTAGAAATGTTGGCTTCCACAAGATGTCTCCTTCTGGGAGCAGGTACCCTCGGATGCCAAGTTGCTCGAATGCTTATGGCATGGGGTGTCCGAAAAATTACATTGGTTGACAGTGGTAAGGTCTCAATGTCTAATCCAATAAGGCAGTCTCTTTATGCGCTTGATGACTGTTTAAATGGTGGCAAATTTAAGGCCGTTGCAGCAGTTGAAAGTCTCAAGCGAATATTTCCAGCAGTGGAAGCAGAAGGAGTTGTGATGGCTATTCCGATGCCTGGACATCCAGTGTCTAGCCAAGAAGAAAGTAATATACTTCAGGACTGCAGACATTTGAGTGATTTGATCAACTCACATGATGCAATCTTTCTATTAACTGATACACGGGAAAGTCGGTGGCTTCCTAGTCTACTTTGTGCTAGTGCTAACAAGATCACTATTACTGCAGCCTTAGGTTTCGATAGCTTTCTAGTGATGCGTCATGGAGCAGGCCCTTTGGATGCTCTACACAACTCACAAGCTGAAACTTCGAATAAGCTCTCTGCCAGTATGGAGAATCTCTCCCTTTCGAACCAAAAAGAGTCAGTGCGATTGGGATGTTACTTCTGCAATGATGTGGTTGCACCAATTGATTCAACGGCTAACCGTACCCTGGACCAACAATGTACAGTTACTCGTCCTGGGCTGGCTCCTATTGCATCAGCCCTTGCTGTTGAACTTTTGGTTGGAGTCTTGCATCATCCTTCTGGAATATGTGCCAAAGCTGAGTTTGCAAACTCTAATGATAACGGCAGCACTGAACAACCTCTTGGCATTCTACCTCATCAGATTCGGGGCTCCATATCTCAGTTTTCTCAGATGACACTTGTCGGTCATGCTTCAACTTGTTGCACTGCTTGTTGTAGCACGGTTGTATCAGAATATCGAACGAAAGGGATGGACTTCATACTTCAAGCTATCAATCATCCTACATATCTGGAGGATCTAACCGGACTAACAGAACTCATGAAATCAGCAGGATCTTACACGCTTGACTGGGATAACGATAGTGAAAATGATGACAACGACGATGATGATGACTGTGTAGAAATATAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc11g068930.1.1SL2.50ch11:53486487..53491275716-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc11g068930.1SL2.50ch11:53486488..534912754,788-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc11g068930.1.1.1SL2.50ch11:53491140..53491275136-n/a
exonexon:Solyc11g068930.1.1.10SL2.50ch11:53487952..53488140189-n/a
exonexon:Solyc11g068930.1.1.11SL2.50ch11:53487618..53487818201-n/a
exonexon:Solyc11g068930.1.1.12SL2.50ch11:53487422..53487537116-n/a
exonexon:Solyc11g068930.1.1.13SL2.50ch11:53487176..53487335160-1
exonexon:Solyc11g068930.1.1.14SL2.50ch11:53486488..53486673186-n/a
exonexon:Solyc11g068930.1.1.2SL2.50ch11:53490099..53490316218-2
exonexon:Solyc11g068930.1.1.3SL2.50ch11:53489568..53489759192-n/a
exonexon:Solyc11g068930.1.1.4SL2.50ch11:53489430..5348948455-n/a
exonexon:Solyc11g068930.1.1.5SL2.50ch11:53489248..5348934295-2
exonexon:Solyc11g068930.1.1.6SL2.50ch11:53488919..53489108190-n/a
exonexon:Solyc11g068930.1.1.7SL2.50ch11:53488715..53488820106-2
exonexon:Solyc11g068930.1.1.8SL2.50ch11:53488493..53488637145-1
exonexon:Solyc11g068930.1.1.9SL2.50ch11:53488242..53488400159-n/a
intronintron:Solyc11g068930.1.1.10SL2.50ch11:53488141..53488241n/a-n/a
intronintron:Solyc11g068930.1.1.11SL2.50ch11:53487819..53487951n/a-n/a
intronintron:Solyc11g068930.1.1.12SL2.50ch11:53487538..53487617n/a-n/a
intronintron:Solyc11g068930.1.1.13SL2.50ch11:53487336..53487421n/a-n/a
intronintron:Solyc11g068930.1.1.14SL2.50ch11:53486674..53487175n/a-n/a
intronintron:Solyc11g068930.1.1.2SL2.50ch11:53490317..53491139n/a-n/a
intronintron:Solyc11g068930.1.1.3SL2.50ch11:53489760..53490098n/a-n/a
intronintron:Solyc11g068930.1.1.4SL2.50ch11:53489485..53489567n/a-n/a
intronintron:Solyc11g068930.1.1.5SL2.50ch11:53489343..53489429n/a-n/a
intronintron:Solyc11g068930.1.1.6SL2.50ch11:53489109..53489247n/a-n/a
intronintron:Solyc11g068930.1.1.7SL2.50ch11:53488821..53488918n/a-n/a
intronintron:Solyc11g068930.1.1.8SL2.50ch11:53488638..53488714n/a-n/a
intronintron:Solyc11g068930.1.1.9SL2.50ch11:53488401..53488492n/a-n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17986538%2Fdetails feature 17986538
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