Solanum lycopersicum mRNA Solyc11g069470.1.1

mRNA details  
Name
Solyc11g069470.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc11g069470.1.1
Length
2,526
  
Description
Class III homeodomain-leucine zipper (AHRD V1 ***- Q1WD30_GINBI); contains Interpro domain(s) IPR013978 MEKHLA
Location(s)
SL2.50ch11:54067259..54072771
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006355
  • GO:0045449
Length
5513
Nb exon
18
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc11g069470.1.1 Class III homeodomain-leucine zipper (AHRD V1 ***- Q1WD30_GINBI); contains Interpro domain(s) IPR013978 MEKHLA

ATGGCTATGGTGGCTCAACAGCATAGGGAGAGTAGTAGTGGTAGTATTACTAAACATCTTGATAGTAGTGGAAAGTATGTTCGATATACGGCTGAGCAAGTTGAGGCTTTGGAGAGGGTTTATGCAGAGTGTCCTAAGCCTAGCTCGTTGCGTCGACAGCAATTGATCCGTGAATGTCATATTCTGTCGAATATCGAGCCTAAGCAGATCAAAGTTTGGTTTCAGAACAGAAGGTGTCGAGAGAAGCAAAGGAAAGAGTCTTCTCGATTGCAGACTGTGAACAGAAAGTTGTCTGCGATGAATAAACTGTTGATGGAGGAGAATGACCGCTTGCAGAAACAAGTCTCGCAGCTTGTATGTGAAAATGGCTATATGCGGCAACAATTGCAAAGTGTATCGGCGGCCACTACTGATGTAAGTTGTGAATCAGTGGTAACCACTCCTCAGCATTCCCTTAGAGATGCTAACAACCCTGCTGGACTACTACCAATTGCAGAAGAAACCTTGGCAGAGTTCCTTTCTAAGGCTACAGGAACTGCTGTCGATTGGGTCCCGATGCCTGGGATGAAGCCTGGTCCGGATTCAGTTGGGATTTTTGCCATCTCACACAGTTGCAGTGGAGTGGCAGCCCGAGCATGTGGTCTTGTTAGTTTAGAGCCAACAAAGATTGCTGATATCCTCAAAGATCGACCTTCTTGGTTCCGCGACTGCCGGAATGTTGAAGTTATCACAATGTTTCCTGCTGGAAATGGTGGTACAGTTGAGCTTTTGTATACCCAGATATATGCTCCCACAACTCTGGCTCCCGCGCGTGATTTTTGGACGCTGAGATACACAACAACCCTAGACAATGGTAGTCTCGTGGTTTGTGAAAGATCCCTATCTGGTAATGGGCCTGGCCCAAATCCTACTGCTGCTTCCCAGTTTGTAAGAGCTCAAATGCTTCCATCTGGATATCTGATCCGACCGTGTGATGGTGGAGGATCAATCATACATATTGTTGATCACCTGAATCTTGAGGCATGGAGTGCCCCTGAGATTTTGCGTCCACTCTATGAATCGTCGAAAGTTGTGGCACAGAAAATGACTATTGCAGCACTGCGATATGCAAGGCAACTAGCTCAAGAGACTAGCGGCGAGGTAGTATATGGTCTAGGAAGGCAACCTGCTGTTCTTCGAACATTTAGCCAGAGATTATGCAGAGGGTTCAATGATGCCATCAATGGATTCGGTGACGATGGCTGGTCAATGTTAAGTTCAGATGGTGCTGAAGATGTCATAGTTGCTGTCAATTCAAGGAAGAACCTCGCAACCACCTCCATTCCTCTTTCCCCGCTTGGTGGCGTCCTTTGTGCCAAAGCATCAATGCTACTCCAGAATGTCCCCCCTGCCGTACTGGTTCGGTTTCTGAGGGAGCACCGTTCAGAGTGGGCAGACTTTAATGTTGATGCTTTTGTAGCTTCTGCATTGAAGTCTTGTCCGTATACATATCCTGGGATGAGGCCTACCAGATTTACCGGTAGCCAGATAATAATGCCACTTGGCCACACAATTGAGCATGAAGAAATGCTTGAAGTTATTAGACTTGAAGGGCACTCTATTGGACAGGAAGATGCTTTTATGCCAAGAGATATTCACCTTTTACAGATGTGTAGTGGCACTGATGAGAATGCAGTTGGAGCCTGTTCTGAACTAGTTTTTGCCCCTATTGATGAGATGTTTCCAGATGATGCACCTTTGCTTCCCTCCGGATTTCGCATTATTCCTCTCGAATCAAAATCAGGTGATGCCCAGGATACGTTGAACGCACATAGAACATTAGATCTAGCATCAAGTCTTGAAGTGGGCCCAGCAACAAACTCGACTACTGGAGATGCAGCTTCTTGTTACAGTGCACGATCTGTACTGACAATCGCTTTCCAATTTCCATTTGAGGACAATCTTCAGGACAATGTGGCTACCATGGCCCGACAGTATGTTCGCAGTGTGGTTTCGTCTGTCCAACGAGTTGCCATGGCAATATCTCCTACGGGAATGAATCCTACACTGGGGGCCAAGCTTTCTCCAGGCTCACCAGAAGCTGTAACATTGTCGCATTGGATCTGCCAGAGCTATAGTTATCACATGGGAACAGAGTTACTTCGAGCTGATTCTAGTGGCGATGAATCAGTACTAAAGAATCTCTGGCAACACCAGGATGCAATTTTGTGCTGCTCATTGAAGTCGCTGCCAGTTTTCATTTTTGCTAATAAGGCCGGACTCGACATGCTGGAGACAACATTAGTTGCATTACAGGACATTTCTCTAGATAAGATATTTGATGAATCCGGAAGGAAAGTGTTGCTCTCAGAATTTGCCAAGATTATGGAACAGGGTTTCGCGTGTTTGCCTGGTGGTATCTGCATGTCAACAATGGGACGACATATTTCATATGAACAAGCTATCGCGTGGAAAGTGTTTGCGTCGTCTGAAGAAAATGCTGTCCACTGTTTGGCCTTTTCGTTTATCAACTGGTCATTCGTGTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc11g069470.1.1SL2.50ch11:54067258..54072771842+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc11g069470.1SL2.50ch11:54067259..540727715,513+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc11g069470.1.1.1SL2.50ch11:54067259..54067491233+n/a
exonexon:Solyc11g069470.1.1.10SL2.50ch11:54070034..54070140107+n/a
exonexon:Solyc11g069470.1.1.11SL2.50ch11:54070262..54070436175+1
exonexon:Solyc11g069470.1.1.12SL2.50ch11:54070657..54070845189+n/a
exonexon:Solyc11g069470.1.1.13SL2.50ch11:54070957..5407103781+n/a
exonexon:Solyc11g069470.1.1.14SL2.50ch11:54071109..54071243135+n/a
exonexon:Solyc11g069470.1.1.15SL2.50ch11:54071340..54071674335+n/a
exonexon:Solyc11g069470.1.1.16SL2.50ch11:54071943..54072048106+1
exonexon:Solyc11g069470.1.1.17SL2.50ch11:54072317..54072466150+n/a
exonexon:Solyc11g069470.1.1.18SL2.50ch11:54072619..54072771153+n/a
exonexon:Solyc11g069470.1.1.2SL2.50ch11:54067773..54067932160+1
exonexon:Solyc11g069470.1.1.3SL2.50ch11:54068318..5406840386+n/a
exonexon:Solyc11g069470.1.1.4SL2.50ch11:54068559..5406864991+1
exonexon:Solyc11g069470.1.1.5SL2.50ch11:54068751..5406884696+n/a
exonexon:Solyc11g069470.1.1.6SL2.50ch11:54068956..54069069114+n/a
exonexon:Solyc11g069470.1.1.7SL2.50ch11:54069155..5406923884+n/a
exonexon:Solyc11g069470.1.1.8SL2.50ch11:54069572..54069727156+n/a
exonexon:Solyc11g069470.1.1.9SL2.50ch11:54069810..5406988475+n/a
intronintron:Solyc11g069470.1.1.1SL2.50ch11:54067492..54067772n/a+n/a
intronintron:Solyc11g069470.1.1.10SL2.50ch11:54070141..54070261n/a+n/a
intronintron:Solyc11g069470.1.1.11SL2.50ch11:54070437..54070656n/a+n/a
intronintron:Solyc11g069470.1.1.12SL2.50ch11:54070846..54070956n/a+n/a
intronintron:Solyc11g069470.1.1.13SL2.50ch11:54071038..54071108n/a+n/a
intronintron:Solyc11g069470.1.1.14SL2.50ch11:54071244..54071339n/a+n/a
intronintron:Solyc11g069470.1.1.15SL2.50ch11:54071675..54071942n/a+n/a
intronintron:Solyc11g069470.1.1.16SL2.50ch11:54072049..54072316n/a+n/a
intronintron:Solyc11g069470.1.1.17SL2.50ch11:54072467..54072618n/a+n/a
intronintron:Solyc11g069470.1.1.2SL2.50ch11:54067933..54068317n/a+n/a
intronintron:Solyc11g069470.1.1.3SL2.50ch11:54068404..54068558n/a+n/a
intronintron:Solyc11g069470.1.1.4SL2.50ch11:54068650..54068750n/a+n/a
intronintron:Solyc11g069470.1.1.5SL2.50ch11:54068847..54068955n/a+n/a
intronintron:Solyc11g069470.1.1.6SL2.50ch11:54069070..54069154n/a+n/a
intronintron:Solyc11g069470.1.1.7SL2.50ch11:54069239..54069571n/a+n/a
intronintron:Solyc11g069470.1.1.8SL2.50ch11:54069728..54069809n/a+n/a
intronintron:Solyc11g069470.1.1.9SL2.50ch11:54069885..54070033n/a+n/a
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Related viewsNone found
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