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Solanum lycopersicum mRNA Solyc11g069500.1.1

mRNA details  
Name
Solyc11g069500.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc11g069500.1.1
Length
2,100
  
Description
Auxin response factor 16 (AHRD V1 ***- D9IVB4_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
Location(s)
SL2.50ch11:54104934..54108069
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0046983
  • GO:0006355
Length
3136
Nb exon
4
Sifter term
  • GO:0046982
  • GO:0005516
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc11g069500.1.1 Auxin response factor 16 (AHRD V1 ***- D9IVB4_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor

ATGAAGGAGGTTTTGGAGAAGTGTGTGGATTCACAGCTATGGCACGCCTGTGCAGGAGGAATGGTGCAAATCCCTCCGGTTAACTCCAAAGTCTACTATTTTCCACAAGGGCATGCTGAGCATACTCTTATGAATGTGGATTTCTCAGCTCTACCAAGAAGTCCTGCTCTGATTCTATGCAGAGTAGCTGCTGTGAAGTTCTTAGCGGACCCTGAAACAGATGAGGTTTATGCTAAGATTAGGGTTGTCCCAGTTGGGAACAAGGGGAATGACTTTGATGATGATGATGACATTTTGGGTAGTAATGAGTCAGGAACAGCTGAAAAACCCAATTCATTTGCCAAGACATTGACTCAATCAGATGCAAATAATGGTGGTGGATTCTCTGTGCCTAGATACTGTGCAGAGACAATATTTCCTAGGTTGGATTACACGGCTGACCCGCCTGTGCAGACCGTGACAGCCAAAGATGTTCATGGTGAAAGTTGGAAGTTTAGGCACATTTATAGAGGTACTCCCAGGAGGCATTTGTTAACGACTGGTTGGAGTAGTTTTGTGAATCAGAAGAAACTTGTTGCTGGAGATTCCATTGTGTTTTTGAGGGCAGAAAATGGTGAACTTTGTGTTGGAATTCGTAGGGCGAAAAGAGGTGGTATTGGTGGGCCTGAAGCCCCATCTGGATGGAACTCTGGTGCTGGAAATTATGGTGGATTTTCTGCGTTTTTGAGGGAAGAGATGAGCAAAAATGGAAATTTGACTTCTCCTACTAGGAGCTTAAGGGGAAAGGGAAGGGTGAGGCCTGAATCAGTTGTTGAAGCTGCATATCTTGCTTCTAGTGGGCAGCCTTTTGAAGTTGTTTATTATCCCCGTGCAAACACACCAGAATTTTGTGTTAGGGCATCTTCAGTGAATGCTGCAATGAGGATTCAATGGTGCTCAGGAATGAGGTTCAAAATGGCTTTTGAAACTGAGGATTCTTCTCGAATCAGTTGGTTCATGGGAACTATATCCTCCATTCAACTTGCTGATCCCATCCGCTGGCCCAATTCGCCATGGAGGCTTCTTCAGGTGGCATGGGATGAACCTGATTTATTGCAAAACGTAAAACATGTCAGCCCATGGCTTGTCGAATTGGTCTCAAATATGCCAGTCATTCACCTCTCGCCCTTCTCACCGCCAAGAAAAAAGCTGCGTCTACCACCAGATTTCTCACTTGACAGCCAGTTTCAGTTACCATCTTTTTCAGGCAACCCCCTCAGGTCCAGCAGTCCTTTCTGTTGTTTATCTGACAACATCACTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGAGTACCTTTATTGGATCTTCACCTTAGCAACAAATTACCGTCAGGACTGTTACCACCAAGTTTCCAGCGCGTTGCAGCCAACTCACAACTTCCTAATGTCATCAATAAGTGCCAAAATGACAGAAATGATAACATCTCTTGTTTGCTTACAATGGGTACTTCAAGTAAGACATTGGACAAAAATGATAGTGTGAATACACCTCGGTTCTTACTCTTCGGTCAGCCAATTCTGACTGAGCAACAAATCTCTAATGGATGTTCTGTCAGTGCTCCACAAGTAGTCCAAACAGGGAAAGACTTAGGAAGGATACAACCGATCAACGAAAAACATCCTTCTGAGCAGAAAGGCAGCATTCAAGACAATCTATCAAGTGCAACATTTTTCTGGAATCGAGGTTATCATGCAGCTGAACTTGGTGTACTCAATACTGGTCACTGCAAAGTATTCCTCGAGTCAGAAGATGTTGGCCGTACACTTGATCTGTCAGTTATGGGATCATATGAAGAACTGTACAAAAGACTTGCAAACATGTTTGGACTTGAAAGACCAGATATGCTGACCCGTGTGCTCTATCATGATGCAACAGGTGCTGTTAAACACACCGGAGATGAACCATTCAGTGACTTTGTTAAGAGTGCAAAAAGATTGACAATTCTGATGAACTCAAGCAGCAATATTAAAAGGAAATGGTTAACTGGTCTCGCAACTGCTGAACGTGGTCTAGATTCATCAAACCAGGCAGGACCTCTTAGCATCTTTGCATAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc11g069500.1.1SL2.50ch11:54104933..54108069700-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc11g069500.1SL2.50ch11:54104934..541080693,136-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc11g069500.1.1.1SL2.50ch11:54107002..541080691,068-n/a
exonexon:Solyc11g069500.1.1.2SL2.50ch11:54105337..54106223887-n/a
exonexon:Solyc11g069500.1.1.3SL2.50ch11:54105136..5410519863-1
exonexon:Solyc11g069500.1.1.4SL2.50ch11:54104934..5410501582-1
intronintron:Solyc11g069500.1.1.2SL2.50ch11:54106224..54107001n/a-n/a
intronintron:Solyc11g069500.1.1.3SL2.50ch11:54105199..54105336n/a-n/a
intronintron:Solyc11g069500.1.1.4SL2.50ch11:54105016..54105135n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17987341%2Fdetails feature 17987341
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