Solanum lycopersicum mRNA Solyc11g071600.1.1

mRNA details  
Name
Solyc11g071600.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc11g071600.1.1
Length
4,095
  
Description
Aldehyde oxidase (AHRD V1 ***- Q9FV23_SOLLC); contains Interpro domain(s) IPR002346 Molybdopterin dehydrogenase, FAD-binding
Location(s)
SL2.50ch11:55016842..55023420
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0009055
  • GO:0051536
  • GO:0055114
  • GO:0050660
Length
6579
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc11g071600.1.1 Aldehyde oxidase (AHRD V1 ***- Q9FV23_SOLLC); contains Interpro domain(s) IPR002346 Molybdopterin dehydrogenase, FAD-binding

ATGGAAGAAAAACAAAAGAAAGTGAGTTTGGTTTTGGCAGTTAATGGAGAAAGGTTTGAGTTGCCATGTGTTGATCCTTCTACAACTCTGCTTCAGTTCTTGCGCTCTGAGACTTGTTTCAAGAGTCCCAAGCTTGGTTGTGGTGAAGGTGGTTGTGGAGCTTGTGTCGTTCTGGTGTCGAAGTATGATCCCAGTCATAAAAAGGTTGAAGATTTTAGCGTGAGTTCGTGCCTTACACTTCTTTGCAGTTTGAATGGTTGTTCAATTACTACAAGTGAAGGCCTTGGGAACACCAGAGATGGTTTTCACTCTATTCATGAAAGATTTGCCGGTTTCCATGCTTCTCAATGCGGCTTTTGCACTCCTGGCATGTGTATGTCATTTTTTTCAGCTCTTGTCAATGCCGATAAAGGAAACAAACCCAATCCTCCATCAGGATTCTCTAAGCTTACTTCATCTGAAGCTGAAAAGGCCATCACAGGGAACCTTTGTCGATGCACTGGATACCGGCCCATTGCTGATGCCTGCAAGAGTTTTGCTGCTGATGTTGATATAGAGGATTTGGGGTTCAATTCTTTTTGGAAAAAGGGAGATTCCAAGGAAGTGAAAGTAAGTAAGTTACCTCCCTATGATCCAACTAAGAATTTTAGTACATATCCTGAGTTCTTGAAAAGTGAATCCACTACGAATTCGGACTCCTCAAGGAGATACCCTTGGTACAGTCCTGTTTCCATTGAGGAGCTACGGAGCTTGTTGTACTCCAATGTGATGGAAAATGGTGCAAGCTTTAAACTTGTCGTTGGTAATACCGGCACAGGTTATTATAAGGAAACTCAGCCATATGATCATTATGTTGATCTCAGGTACATTCCTGAATCCTCAATCATCGAAAGAGATCAGAATGGCATTGAAGTTGGAGCAACCGTGACTATCTCTAAACTGATTTCATTCTTGAAAGAGGAAAACATAGTCAATATTGGTTCATACGGGACGTTGGTGTCCCAAAAACTGGCTAGACACATGGAGAAGATTGCTTCACCATTTGTTAGAAACTCTGCTAGTGTGGGAGGAAATTTGGTTATGGCACAGAAGAATGGTTTTCCTTCAGATATTGCTACATTATTTCTTGGACTTAGTGCTACTGTTAGATTGATGACCAGTCATGGATTTGAAAAGCTCTCATTGGAGGAGTTATTATCGAGACCACCGCTAGACTCAAAGACTGTGCTTCTAAGTGTTTGCATCCCATTTAAGAATGCTCAAAGTTCTCTCCAAACTAACTCTAAATTGTTGTTTGAAACCTTTCGAGCTTCTCCACGACCTCATGGGAATGCCATTGCATATGTAAATGCGGCTTTCCACGCTGATGTTTCTCACTGCAAGAACGGTGTCCTGATAAACAATATCCAGTTGGCGTTTGGTGCTTATGGAACAAAACATGCAACAAGGGCTAAAAAAGTAGAGGAATATCTAGAGGGGAAGATATTAAATGTACATGTTTTATATGAAGCACTTAAATTGGTCAAACTAGCAGTAATACCGGAAGATGACACTCTACACCCCGAGTACAGATCAAGCTTGGCCGTCAGTTATGTTTTCAAGTTTCTTCATCCCTTAACTGATGTTCATTCTGCTATTTCTGGTGGTTTACTCAATGGAATTAGTGACATCTCAGTTGAGGAACTTTCTAAAAGTTGTAATGATGGTCGCATTAGTCAGGGGAGAGAACAAACACTATTGTCTTCTGCTAAGCAAGTCGTGGAATATTCAAGCACCGAGTACTATCCAGTCGGTGAACCGATGAAGAAGGTTGGAGCTGCGATGCAAGCTGCTGGTGAAGCTGTTTATGTAGATGACATTCCTTCACCACCAAACTGCCTGCATGGATCATTTATCTATAGTACAAAACCATTAGCAGGTGTAACTGGAATCCAACTCGAGTCAAATCGATTAACAGATGGAGTCACCGCTGTTATTACTTTTAAAGATATCCCAAGCGGAGGGGAAAATATAGGAGTTCTTACAAAGTTTGGTACCGAGCCCTTATTTTCAGATGATCTCGCCCGATATGCTGGCGACAGAGTTGCTGTTGTGGTTGCTGACAGTCAGATGTCTGCTGATGTGGCTGCAAGAACAGCCCTCGTTGAGTACGACACTGAAAATATAGATCCTCCCATCTTAACCGTTGAGGAGGCTGTTGAGAAATCTAGCTTTTTCCAGATCCCACCATTTCTAAATCCAAAACAGGTTGGTGATTTCTCCAAAGGAATGGCTGAGGCAGATCACAAGATTCTCTCTGCTGAGATAAGGCTCGGTTCCGAATACTATTTTTATATGGAGACACAGACTGCCCTTGCGATTCCAGATGAAGACAACTGCATGGTTGTTTATACTTCAAGTCAGTACCCTGAGTATTCGCATCGTGTTATTGCCAGTTGTCTTGGTGTTCCCGAACACAATATCCGCGTAATTACAAGAAGGGTTGGAGGTGGCTATGGGGGCAAGGCAATCAGAGCAATGCCTGTTTCCGCAGCCTGTGCACTAGCAGCATACAAGTTAAGACGACCTGTCAGGATATACGTCAACCGGAATAGTGACATGATAATGACAGGAGGACGACACCCGATGAAAGTAACGTACAGTGTAGGATTCAAATCGAGCGGAAAGATCACAGCATTACATCTTGATATATTGATAAATGCCGGGATCTCGGAAGATGTAAGCCCCATTGTACCATCAAATGTGATAAAAGCACTAAAAAAATATGATTGGGGTGCCTTATCTTTCAATGTAAAACTGTGCAAGACGAATCTTTCCAGCAAATCAGCTATGCGGGCCCCTGGTGAAGTGCAAGGATCTTATATAGCCGAAGCTATAATGGAGCGTGTTGCAGGTTTACTTTCGATGGAGGTGGACTCAGTCAGAAACAAAAATTTCCATACATTTGAAAGCCTTAATTTATTCTATGGTAACATTGTAGCAGAAGGAGAATATACATTGCCTAGTATCATGGATAAGTTGGCAGTGTCCTCAAGCTTTTTCCAACGAAGCAAGATGATAGAACAGTTCAACCAGAATAACACATGGAAGAAAAGGGGTATTTCTCGAGTGCCAATCGTGTATGAAGTCATGCAAAGACCAACCTCAGGAAAAGTCAGTATTCTGCAAGATGGATCAATCGTAGTAGAGGTTGGAGGGATTGAACTAGGCCAAGGGCTATGGACAAAGGTTAGACAAATGACTGCTTATGCTCTTGGTTTTATTGATAGTAGTTGGGCTGAAGACCTCGTGGAGAAAGTACGAGTCATACAAGCAGACACCTTAAGCTTAGTACAAGCCGGGTTTACAGCTGGAAGCACTACATCGGAATCAAGCTGTGAAGCTGTTAGACTTTGCTGTGACGTATTGGTTGAAAGACTGACCCCTTTGAAGAAACAGCTGCAGGAACAAAATGGTTCTGTTGATTGGCCAATGCTGATTCTCCAGGCACAAACGCAATCAGTAAACTTAGCAGCAAATTCTTATTATGTACCAGAATCCGGTTCCATGAGTTATTTGAACTTTGGCGCTGCTGTCAGTGAGGTGGAGATTGATATTCTGACTGGAGAGACAGCCATTTTGCAGTCGGATATTATTTACGACTGTGGGCAGAGCTTGAATCCTGCTGTTGATTTGGGACAGATTGAAGGGGCTTTCGTACAAGGAATTGGATTTTTCATGCACGAAGAATATCTCACCAACGAAGACGGGCTAATGGTCTCGAATAGCACTTGGAAATACAAGATCCCAACAATTGACACTATACCTCGGAATTTCAATGTTCATGTGCTAAACAGTGGACATCATGAAAAACGTGTTCTCTCGTCTAAAGCATCTGGTGAACCGCCTCTGCTTCTGGCAGCTTCGGTCCACTGTGCAACAAGAGAAGCTGTTAAAGCAGCACGCGAACAGCTCAAACTTTGGGGCAATCTGGACGGGTCTGTTTCAGAATTCTATCTGGACATCCCCGCCATATTACCCGTTGTGAAGACACAGTGTGGCCTGGATTATGTAGAGAAATATTTGGAAAGTATCTTGGCTCAGAAATCTAACTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc11g071600.1.1SL2.50ch11:55016841..550234201,365+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc11g071600.1SL2.50ch11:55016842..550234206,579+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc11g071600.1.1.1SL2.50ch11:55016842..55016989148+n/a
exonexon:Solyc11g071600.1.1.10SL2.50ch11:55023197..55023420224+2
exonexon:Solyc11g071600.1.1.2SL2.50ch11:55017537..550192221,686+2
exonexon:Solyc11g071600.1.1.3SL2.50ch11:55019317..55019576260+2
exonexon:Solyc11g071600.1.1.4SL2.50ch11:55019653..55019862210+n/a
exonexon:Solyc11g071600.1.1.5SL2.50ch11:55019997..55020215219+n/a
exonexon:Solyc11g071600.1.1.6SL2.50ch11:55020422..55021384963+n/a
exonexon:Solyc11g071600.1.1.7SL2.50ch11:55021785..5502188096+n/a
exonexon:Solyc11g071600.1.1.8SL2.50ch11:55022337..5502243599+n/a
exonexon:Solyc11g071600.1.1.9SL2.50ch11:55022601..55022790190+n/a
intronintron:Solyc11g071600.1.1.1SL2.50ch11:55016990..55017536n/a+n/a
intronintron:Solyc11g071600.1.1.2SL2.50ch11:55019223..55019316n/a+n/a
intronintron:Solyc11g071600.1.1.3SL2.50ch11:55019577..55019652n/a+n/a
intronintron:Solyc11g071600.1.1.4SL2.50ch11:55019863..55019996n/a+n/a
intronintron:Solyc11g071600.1.1.5SL2.50ch11:55020216..55020421n/a+n/a
intronintron:Solyc11g071600.1.1.6SL2.50ch11:55021385..55021784n/a+n/a
intronintron:Solyc11g071600.1.1.7SL2.50ch11:55021881..55022336n/a+n/a
intronintron:Solyc11g071600.1.1.8SL2.50ch11:55022436..55022600n/a+n/a
intronintron:Solyc11g071600.1.1.9SL2.50ch11:55022791..55023196n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17988518%2Fdetails feature 17988518
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