Solanum lycopersicum mRNA Solyc12g005950.1.1

mRNA details  
Name
Solyc12g005950.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g005950.1.1
Length
2,034
  
Description
WD-repeat protein (AHRD V1 *--- B0JNY6_MICAN); contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat, region
Location(s)
SL2.50ch12:576268..587430
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0008270
Length
11163
Nb exon
13
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g005950.1.1 WD-repeat protein (AHRD V1 *--- B0JNY6_MICAN); contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat, region

ATGGTGGAAAGTTCAGTTGGAGGGGTGGTGCCAGCAGTGAAGGGGGAGGTGATGAGGAGGATGGGGGACAAAGAGGAGGGGGGTAGTGTAACTCTAAGGGATGAAGAAGTTGGGACAGTGACAGAATGGGAATTGGACAGGGAATTGTTGTGTCCTATATGTATGCAGATCATAAAGGATGCATTTTTAACAGCTTGTGGGCACAGTTTTTGCTATATGTGCATAGTTACTCATCTTCACAACAAGAGTGATTGCCCCTGTTGTTCTCATTATCTCACTACCAGTCAACTCTATCCCAATTTCCTACTTGACAAGCTATTGAAGAAGACATCTGCCCGTCAGATTTCAAAAACTGCATCCCCTGTTGAACAGTTTCGTCATTCATTGGAACAGGGTTCTGAAGTGTCAATTAAGGAGCTGGACGCTCTATTGTTGATGTTGTCAGAGAAAAAGAGGAAATTGGAACAGGAGGAAGCAGAGCGAAATATGCAAATTCTGCTAGACTTCTTACAGATGTTAAGGAAGCAAAAAGTTGATGAACTCAATGAGGTGCAACATGATCTGCAATACATCAAAGAGGACTTAAATTCAGTAGAGAGACATAGAATAGACCTATACCGGGCTAGGGACCGGTATTCAATGAAGCTCCGAATGTTAGCAGATGATCCTATTGGGAAAAAACCTTGGTCTTCATCAACTGATAGGAACTTTGGTGGTCTTTTCTCCACTTCACGAAATGCACCTGGAGGATTACCGACTGGAAACTTGACATTCAAAAAGGTGGACAGCAAAGCTCAAATAAGCTCTCCTGGACCACAGAGAAAAGATACTTCAATCAGTGAACTGAACTCACAACATATGAGTCAATCAGGTCTGGCTGTGGTTAGGAAGAAGCGTGTCAATGCACAGTTCAATGATCTCCAAGAATGTTACTTGCAAAAGAGACGTCAATTGGCAAACAAATCGCGAGTTAAGGAAGAAAAGGATGCAGATGTCGTACAAAGAGAAGGTTACAGTGAAGGACTAGCAGATTTTCAGTCTGTACTTAGCACTTTCACTCGTTATAGTCGGTTAAGAGTCATTGCTGAACTTCGGCATGGGGATCTGTTTCACTCGGCCAATATTGTTTCAAGCATTGAATTTGATCGGGATGATGAGTTGTTTGCTACTGCTGGAGTTTCACGGCGTATAAAAGTTTTTGACTTCTCTTCAGTTGTAAATGAACCTGCAGATGCACACTGCCCTGTTGTTGAAATGTCTACCCGATCTAAGCTGAGCTGCTTGAGTTGGAATAAGTATACCAAGAACCACATAGCTAGTAGTGATTATGATGGAATAGTAACTGTATGGGATGTGACGACTAGACAGAGTGTGATGGAATATGAAGAGCATGAGAAACGGGCTTGGAGTGTTGATTTTTCACGCACAGAACCCTCGATGCTTGTATCTGGCAGTGATGATTGTAAGGTCAAAGTTTGGTGCACGAAGCAGGAAGCAAGTGTTCTTAATATTGACATGAAGGCAAATATATGCTGTGTAAAATATAATCCTGGATCTAGTGTTCATATAGCGGTTGGCTCTGCGGATCATCATATTCATTATTATGACTTGAGGAACACCAGCCAGCCGGTTCACATTTTTAGTGGCCATAGAAAAGCTGTTTCATATGTAAAATTTTTGTCCAACAATGAACTTGCTTCAGCATCAACAGACAGTACTCTACGATTGTGGGATGTAAAAGATAATTTGCCGGTTCGCACGCTTAGAGGACATACGAATGAGAAGAACTTTGTTGGTCTCTCAGTGAACAATGAATTCCTGTCATGTGGCAGTGAAACAAATGAAGTATTCGTGTACCATAAGGCGATATCCAAACCCGTGACTTGGCATAGATTTGGTTCCCCAGACATAGACGAAGCGGATGAAGATGCAGGATCTTATTTCATCAGCGCAGTGTGCTGGAAGAGCGATAGCCCTACGATGCTAGCTGCTAATAGCCAGGGAACTATAAAAGTGTTAGTCCTTGCAGCTTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g005950.1.1SL2.50ch12:576267..587430678-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g005950.1SL2.50ch12:576268..58743011,163-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g005950.1.1.1SL2.50ch12:587116..587430315-n/a
exonexon:Solyc12g005950.1.1.10SL2.50ch12:577679..577783105-n/a
exonexon:Solyc12g005950.1.1.11SL2.50ch12:576929..577108180-n/a
exonexon:Solyc12g005950.1.1.12SL2.50ch12:576667..576777111-n/a
exonexon:Solyc12g005950.1.1.13SL2.50ch12:576268..576438171-n/a
exonexon:Solyc12g005950.1.1.2SL2.50ch12:584280..58435778-n/a
exonexon:Solyc12g005950.1.1.3SL2.50ch12:582131..582286156-n/a
exonexon:Solyc12g005950.1.1.4SL2.50ch12:581441..581800360-n/a
exonexon:Solyc12g005950.1.1.5SL2.50ch12:580457..580614158-n/a
exonexon:Solyc12g005950.1.1.6SL2.50ch12:580252..58031766-1
exonexon:Solyc12g005950.1.1.7SL2.50ch12:579815..57989379-1
exonexon:Solyc12g005950.1.1.8SL2.50ch12:578394..578549156-n/a
exonexon:Solyc12g005950.1.1.9SL2.50ch12:578211..57830999-n/a
intronintron:Solyc12g005950.1.1.10SL2.50ch12:577784..578210n/a-n/a
intronintron:Solyc12g005950.1.1.11SL2.50ch12:577109..577678n/a-n/a
intronintron:Solyc12g005950.1.1.12SL2.50ch12:576778..576928n/a-n/a
intronintron:Solyc12g005950.1.1.13SL2.50ch12:576439..576666n/a-n/a
intronintron:Solyc12g005950.1.1.2SL2.50ch12:584358..587115n/a-n/a
intronintron:Solyc12g005950.1.1.3SL2.50ch12:582287..584279n/a-n/a
intronintron:Solyc12g005950.1.1.4SL2.50ch12:581801..582130n/a-n/a
intronintron:Solyc12g005950.1.1.5SL2.50ch12:580615..581440n/a-n/a
intronintron:Solyc12g005950.1.1.6SL2.50ch12:580318..580456n/a-n/a
intronintron:Solyc12g005950.1.1.7SL2.50ch12:579894..580251n/a-n/a
intronintron:Solyc12g005950.1.1.8SL2.50ch12:578550..579814n/a-n/a
intronintron:Solyc12g005950.1.1.9SL2.50ch12:578310..578393n/a-n/a
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