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Solanum lycopersicum mRNA Solyc12g006320.1.1

mRNA details  
Name
Solyc12g006320.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g006320.1.1
Length
1,932
  
Description
ATP-dependent RNA helicase (AHRD V1 *-*- Q6L724_HORVU); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch12:841803..847655
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
5853
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g006320.1.1 ATP-dependent RNA helicase (AHRD V1 *-*- Q6L724_HORVU); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

ATGGCTTTTCTCCCTTGTCCATTGAGATATAGCAAAATGAACAGTCTTTTTCTACTGAGGAAGTCTTCATCTTCACTAACATCAAAAAGGGTGTCCATTAATTCCATTTCTCATATCTTCAGTGACAAATTTAGTCCCAGAAATGCCCTTCGAGTACCTCAAGTTCAAAGCTTTACCACTTCTTTAACAGTATCAGCACCACCAATGAACAGGGTTGATGGTAAATTTGGGTATAGTGTTAAGGGATTTCATGGGGGTGGTTGTTGTTTGCAGGCTGCAACAGCGACGGCAATGGCGATGGTGGAATTAGAAGAGGATTGTGAAGAAGGGCTTGAGATTTCGAAACTTGGGATTTCTGAGGAAATTGTTTCAGCTTTGGCACAAAGGGGGATTACTAGTCTTTTTCCAATTCAGAGAGCTGTTTTGGAACCAGCAATGCAGGGGTCAGACATGATTGGCCGAGCTAGAACTGGAACTGGAAAGACACTTGCTTTTGGCATTCCTATCATGGATAAGATCATTCGCTTCAACAGAAAAAAGGGACGGGGAAGAAACCCTTTAGCATTGATCTTGGCTCCCACTAGAGAACTTGCGCGCCAGGTGGACAAGGAATTTTATGAGTCTGCTCCTATTCTGGATACTCTGTGTGTTTATGGTGGGGTTCCCATTTCACGCCAAATGAGTACTCTTGACAGGGGAACAGACATTGTTGTCGGGACACCTGGTCGTATCATTGATTTGCTGAAGAGAGGGTCATTAAATTTATCAGATATCCAGTTTGTTGTTCTAGATGAAGCTGATCAGATGCTTAATGTGGGGTTCGCAGAGGATGTTGAAACCATTCTAGAAAATATTAGGCAGAAACATCAGACAATGATGTTTTCAGCCACGATGCCAAGTTGGATATTGAAACTTACCAAGAAGTTCTTGAAGAAACCAATTCACGTTGATCTTGTAGGAGACTCTGACCAGAAATTAGCTGATGGCATTTCTTTGTATTCAATTGCTTGTGAGATGCGTCAGAAACCGGCAGTTCTTGGACCCTTAATATCGGAGCATGCAAAAGGAGGCAAATGTATTGTCTTCACTCAAACAAAGCGTGATGCTGATAGGCTGGCAGGTGCAATGCAAAGAACTTTGAGGTGTGAAGCTTTGCATGGAGATATCTCACAAAGCCAGAGGGAGAGAACTCTATCTGGTTTCCGACAAGGTCAATTTAATGTATTGGTGGCCACCGATGTTGCTGCCCGAGGACTTGATGTACCTAATGTTGATCTGGTGATACATTACGAACTTCCGAATAATTCAGAGATCTTTGTTCATCGATCTGGTCGAACTGGACGTGCTGGTAAGAAAGGAAGTGCCATTCTCATGCATTCCTCAAAACAGCATAGGGATGTAAAAGGTATTGAACATGATGCCGGATGCAGATTTACAGAGCTCCCAACAATTAAAGTAGAGGCTGGAGCAGTAGAAATGTATAGTGAAATGGGAAAAGATGATGGCCGCTTTGGTTCCTCTGGAGGAGGCACTATGCGTAGTCGATCTAGTGATTTTGGTGGAGGCCGTTCTGGTGGCTATGGAAATAAGAGCAGCAAGTTTGGTCGAGAAGTCTCTTCATCTTCTGTTCGAACAGGTGGATATAGCGCAACTGGTTCAGGAAGATCAAGAGGTGGCTTTAGCGGACCTAGCTCAGGCCGCTCAGGAAAGTTTGGTGGTGGTTCAGGAGACACACGAGGCTCAAAACGTTTGGGTGGTTTCCGCAACTTTGGTGGTTTTGGAAGCTCCAAAAGTTCAAATCGATCGAATAATTTTGCAGAAGAGTTTGATTCAGGCCGTTCTAGAAGATTCGGAGATTCAGATCATGATCGAAACAACCGTTCAAGCCGTTTTGATGTCTTCGGAGATGACAATGATAGTGGTGAATGGTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g006320.1.1SL2.50ch12:841802..847655644-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g006320.1SL2.50ch12:841803..8476555,853-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g006320.1.1.1SL2.50ch12:847242..847655414-n/a
exonexon:Solyc12g006320.1.1.2SL2.50ch12:846236..846363128-n/a
exonexon:Solyc12g006320.1.1.3SL2.50ch12:845101..845512412-1
exonexon:Solyc12g006320.1.1.4SL2.50ch12:844911..84500999-n/a
exonexon:Solyc12g006320.1.1.5SL2.50ch12:843791..844015225-n/a
exonexon:Solyc12g006320.1.1.6SL2.50ch12:842956..843117162-n/a
exonexon:Solyc12g006320.1.1.7SL2.50ch12:841803..842294492-n/a
intronintron:Solyc12g006320.1.1.2SL2.50ch12:846364..847241n/a-n/a
intronintron:Solyc12g006320.1.1.3SL2.50ch12:845513..846235n/a-n/a
intronintron:Solyc12g006320.1.1.4SL2.50ch12:845010..845100n/a-n/a
intronintron:Solyc12g006320.1.1.5SL2.50ch12:844016..844910n/a-n/a
intronintron:Solyc12g006320.1.1.6SL2.50ch12:843118..843790n/a-n/a
intronintron:Solyc12g006320.1.1.7SL2.50ch12:842295..842955n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17991987%2Fdetails feature 17991987
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