Solanum lycopersicum mRNA Solyc12g007230.1.1

mRNA details  
Name
Solyc12g007230.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g007230.1.1
Length
888
  
Description
Auxin responsive protein (AHRD V1 *-*- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein
Location(s)
SL2.50ch12:1648825..1652254
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0046983
Length
3430
Nb exon
5
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g007230.1.1 Auxin responsive protein (AHRD V1 *-*- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein

ATGTCTATATCCATTGAAGGGAACTCTGATAAGAGCTGTGTTTCATCAATGGACAGTAAAGATTTGAACTTTAAGGCAACTGAACTTAGACTAGGCTTGCCTGGTTCTGAATCACCACCAGATAAGAATGATTACCCACTTGGGGTTTTGAAAATTTTCCCTTCTGGAGCTAAAAGGGGTTTTTCTGATACCATAAATGGTGATTCTGGGAGATGGGGTTTTGGATCTGAAGTTGATTTTGTTAAAAACAGTAGCTTTATTGTTTCTCCAAAGGGTGTAAAAGTTGGAAATAAGATTCTTGGTTCTGTTTGCAATGAGAGTAGCTCTGTGAAAGAGGGAACTCCAAAATCACCTAGACCAGTGGAAGAGAAAAAGGCCTTGATTTGTAGTACTAATAGTCATGGGGTTGCTCCAGCTGCAAAGGCACAAGTAGTAGGATGGCCACCAATTAGATCTTTTCGGAAGAATATGGTTAGTAATCCTCCAAAGACTGAGGAAGATGCAAATGGTAAGCTAGTAGCAGGTTGTCATTATGTCAAAGTCAGCATGGATGGTGCTCCGTACCTGAGGAAGGTTGATCTTACTATGTACAACAGCTATAAGGATCTATCTTCAGCACTAGAGAAAATGTTCCGTTGCTTCAAGGCTGGCCAATGTGAAACTCAAGGCATTTCTCTAAGTGATGGACTTAAAGAAAGCAAATTGGCGGATCTTCTACATGGATCTGAATACGCTCTTACTTATGAAGACAAGGACGGTGATTGGATGCTTGTCGGTGATGTCCCATGGGAGATGTTCACAGAATCCTGCAAGAAGCTGAGGATCATGAAGAGTTCAGATGCAAATGGTCTAGCTCCAAGAGCCGCGGAGAAGTGCAAAGATCGTTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g007230.1.1SL2.50ch12:1648824..1652254296+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g007230.1SL2.50ch12:1648825..16522543,430+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g007230.1.1.1SL2.50ch12:1648825..1649246422+n/a
exonexon:Solyc12g007230.1.1.2SL2.50ch12:1650539..1650765227+1
exonexon:Solyc12g007230.1.1.3SL2.50ch12:1651452..1651593142+2
exonexon:Solyc12g007230.1.1.4SL2.50ch12:1652002..165206362+1
exonexon:Solyc12g007230.1.1.5SL2.50ch12:1652220..165225435+2
intronintron:Solyc12g007230.1.1.1SL2.50ch12:1649247..1650538n/a+n/a
intronintron:Solyc12g007230.1.1.2SL2.50ch12:1650766..1651451n/a+n/a
intronintron:Solyc12g007230.1.1.3SL2.50ch12:1651594..1652001n/a+n/a
intronintron:Solyc12g007230.1.1.4SL2.50ch12:1652064..1652219n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17993196%2Fdetails feature 17993196
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